FastQCFastQC Report
Thu 23 Feb 2023
EGAF00002860169

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002860169
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90711285
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT2109910.2325961979262007No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT1500930.16546232367891162No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT1057870.1166194481756046No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)