FastQCFastQC Report
Wed 22 Feb 2023
EGAF00002860180

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002860180
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68703912
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGA855420.12450819394389069No Hit
CCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGAGTT729060.10611622814141937No Hit
CGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGG704320.10251526870842523No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)