Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00002861849 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 47840750 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGGCGTACTATCTCGTA | 442140 | 0.9241911968353339 | Illumina Paired End PCR Primer 2 (97% over 36bp) |
GATCGGAAGAGCGGTTCAGCAGGAATGCCGAGATCGGAAGAGCGGTTCAGC | 382530 | 0.7995903074262005 | Illumina Paired End PCR Primer 2 (97% over 36bp) |
GATCGGAAGAGCGGTTCAGCAGGAATGCGAGATCGGAAGAGCGGTTCAGCA | 56896 | 0.1189279014229501 | Illumina Paired End Adapter 2 (96% over 28bp) |
CGGTTCAGCAGGAATGCCGAGATCGGAAGAGCGGTTCAGCAGGAATGCCGA | 51504 | 0.10765717510699561 | Illumina Paired End PCR Primer 2 (100% over 32bp) |