FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002869265

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002869265
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13183
Sequences flagged as poor quality0
Sequence length154
%GC70

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG1148387.10460441477662No Hit
CGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG2411.828111962375787No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1000.758552681483729No Hit
AGCTGCCTGACCCGCACGGTATTGGCAGTGGAGGCAGCCGCAAAGACCAA870.6599408328908443No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCACCTCTCTCCGCCCCCAGGCCCG580.4399605552605629No Hit
AGCTGCCTGACCCGCACGCCCAGGGCACCCTCTCTCCGCCCCCAGGCCCG470.35651976029735266No Hit
AGCTGCCTGACCCGCACGCCAAGGGCCCCCTCTCTCCGCCCCCAGGCCCG280.21239475081544415No Hit
GCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCGC270.20480922400060686No Hit
AGCTGCCTGACCCGCACGCCCAGGGACCCCTCTCTCCGCCCCCAGGCCCG230.17446711674125767No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCAAGGCCCG210.15929606311158312No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCCCCGCCCCCAGGCCCG200.1517105362967458No Hit
AGCTGCCTGACCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCGC190.1441250094819085No Hit
AGCTGCCTGACCCGCACGGGCTAGTGGAGGCTGGTCAAATGCATAGGCAG180.13653948266707125No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCTG180.13653948266707125No Hit
GGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG170.12895395585223393No Hit
AGCTGCCTGACCCGCACGCCCGGGGCCCCCTCTCTCCGCCCCCAGGCCCG170.12895395585223393No Hit
AGCTGCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCGC160.12136842903739664No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCCCTCCGCCCCCAGGCCCG140.10619737540772207No Hit
AGTTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG140.10619737540772207No Hit
AGCTGCCTGATCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG140.10619737540772207No Hit
AGCTGCCTGACCCGCACGGAGCAGTGGAGGCAGCCGCAAAGACCAAGTCT140.10619737540772207No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCGGGCCCG140.10619737540772207No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)