FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002869270

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002869270
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15205
Sequences flagged as poor quality0
Sequence length154
%GC70

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC1288284.72213087800066No Hit
TTGCGGCTGCCTCCACTGCCCAGGCAGCCAGGCCCCACTTTGCGGCTCTC6083.9986846432094705No Hit
TTGCGGCTGCCTCCACTGCCCCGGTAGCCAGGCCCCACTTTGCGGCTCTC1711.1246300559026636No Hit
TTGCGGCTGCCTCCACTGCCAAGGTAGCCAGGCCCCACTTTGCGGCTCTC510.3354159815850049No Hit
TTGCGGCTGCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCG430.2828017099638277No Hit
TTGCGGCTGCCTCCACTGCCGAGGTAGCCAGGCCCCACTTTGCGGCTCTC430.2828017099638277No Hit
TTGCGGCTGCCTCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCG340.2236106543900033No Hit
TTGCGGCTGCCTCCACTGCAGCACGTGCCTCGGCGGTTACGTGCGGGTCA310.2038803025320618No Hit
TTGCGGCTGCCTCCACTGCCCGGGTAGCCAGGCCCCACTTTGCGGCTCTC300.19730351857941467No Hit
TTGCGGCTGCCTCCACTGTCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC290.1907267346267675No Hit
TTGCGGCTGCCTCCACTGCCTAGGTAGCCAGGCCCCACTTTGCGGCTCTC260.17099638276882606No Hit
TTGCGGCTGCTTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC230.15126603091088459No Hit
TTGCGGCTGCCTCCACTGCCAATACCGTGCGGGTCAGGCAGCTTGTAGAA200.1315356790529431No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCCCTC200.1315356790529431No Hit
GTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC170.11180532719500165No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCGGGCCCCACTTTGCGGCTCTC160.10522854324235449No Hit
TTGCGGCTGCGTCCACTGCCCAGGCAGCCAGGCCCCACTTTGCGGCTCTC160.10522854324235449No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCCC160.10522854324235449No Hit
TGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCG160.10522854324235449No Hit
TTGCGGTTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC160.10522854324235449No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)