FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002869275

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002869275
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14836
Sequences flagged as poor quality0
Sequence length154
%GC70

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG1310788.34591534106228No Hit
CGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG2961.9951469398759776No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1170.7886222701536802No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCACCTCTCTCCGCCCCCAGGCCCG510.3437584254516042No Hit
AGCTGCCTGACCCGCACGCCCAGGGCACCCTCTCTCCGCCCCCAGGCCCG510.3437584254516042No Hit
AGCTGCCTGACCCGCACGCCAAGGGCCCCCTCTCTCCGCCCCCAGGCCCG370.2493933674844972No Hit
GCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCGC320.21569156106767323No Hit
GGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG290.19547047721757888No Hit
AGCTGCCTGACCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCGC280.18873011593421407No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCAAGGCCCG270.18198975465084927No Hit
AGCTGCCTGACCCGCACGCCCAGGGACCCCTCTCTCCGCCCCCAGGCCCG260.17524939336748452No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCCCTCCGCCCCCAGGCCCG200.13480722566729578No Hit
AGCTGCCTGACCCGCACGGTATTGGCAGTGGAGGCAGCCGCAAAGACCAA190.12806686438393097No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCTG180.12132650310056618No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCA170.11458614181720139No Hit
AGTTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG160.10784578053383662No Hit
AGCTGCCTGACCCGCACGCCCAGGGTCCCCTCTCTCCGCCCCCAGGCCCG160.10784578053383662No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCAGGCCCGC160.10784578053383662No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCTGCCCCCAGGCCCG160.10784578053383662No Hit
AGCTGCCTGACCCGCACGCCCAGGGCTCCCTCTCTCCGCCCCCAGGCCCG150.10110541925047183No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCACCCCCAGGCCCG150.10110541925047183No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)