FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002869276

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002869276
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14836
Sequences flagged as poor quality0
Sequence length154
%GC70

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC1238183.45241304933944No Hit
TTGCGGCTGCCTCCACTGCCCAGGCAGCCAGGCCCCACTTTGCGGCTCTC6394.3070908600701No Hit
TTGCGGCTGCCTCCACTGCCCCGGTAGCCAGGCCCCACTTTGCGGCTCTC1410.9503909409544351No Hit
TTGCGGCTGCCTCCACTGCCGAGGTAGCCAGGCCCCACTTTGCGGCTCTC550.3707198705850634No Hit
TTGCGGCTGCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCG400.26961445133459155No Hit
TTGCGGCTGCCTCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCG340.22917228363440278No Hit
TTGCGGCTGCCTCCACTGCCCGGGTAGCCAGGCCCCACTTTGCGGCTCTC310.20895119978430843No Hit
TTGCGGCTGCCTCCACTGCCAAGGTAGCCAGGCCCCACTTTGCGGCTCTC290.19547047721757888No Hit
TTGCGGCTGCCTCCACTGCCTAGGTAGCCAGGCCCCACTTTGCGGCTCTC290.19547047721757888No Hit
TTGCGGCTGCCTCCACGGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC250.16850903208411971No Hit
TTGCGGCTGCCTCCACTGTCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC250.16850903208411971No Hit
TTGCGGCTGCCTCCACTGCCCAGGTCGCCAGGCCCCACTTTGCGGCTCTC240.1617686708007549No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCGGGCCCCACTTTGCGGCTCTC220.14828794823402533No Hit
TTGCGGCTGCCTCCACTGCCCAGGCCGCCAGGCCCCACTTTGCGGCTCTC210.14154758695066055No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACCTTGCGGCTCTC200.13480722566729578No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCGCTTTGCGGCTCTC200.13480722566729578No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCCCTC180.12132650310056618No Hit
TTGCGGCTGCCTCCACTGCCCAGGGAGCCAGGCCCCACTTTGCGGCTCTC180.12132650310056618No Hit
TTGCGGCTGCGTCCACTGCCCAGGCAGCCAGGCCCCACTTTGCGGCTCTC160.10784578053383662No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGTGGCTCTC160.10784578053383662No Hit
TTGCGGTTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC160.10784578053383662No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)