FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002869277

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002869277
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13785
Sequences flagged as poor quality0
Sequence length154
%GC69

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG1179685.57127312295974No Hit
CGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG2541.8425825172288721No Hit
AGCTGCCTGACCCGCACGGTATTGGCAGTGGAGGCAGCCGCAAAGACCAA2171.5741748277112806No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG700.5077983315197679No Hit
AGCTGCCTGACCCGCACGGGGACATCGTCACAACATTTCTGCAGTGGAGG690.500544069640914No Hit
AGCTGCCTGACCCGCACGTAGCAGTGGAGGCAGCCGCAAAGACCAAGTCT590.42800145085237573No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCACCTCTCTCCGCCCCCAGGCCCG410.29742473703300687No Hit
AGCTGCCTGACCCGCACGTAACAGTGGAGGCAGCCGCAAAGACCAAGTCT410.29742473703300687No Hit
AGCTGCCTGACCCGCACGCCCAGGGCACCCTCTCTCCGCCCCCAGGCCCG320.23213638012332247No Hit
AGCTGCCTGACCCGCACGCCAAGGGCCCCCTCTCTCCGCCCCCAGGCCCG280.20311933260790715No Hit
AGCTGCCTGACCCGCACGGGGACCTCGTCACAACATTTCTGCAGTGGAGG260.18861080885019949No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCAAGGCCCG240.17410228509249184No Hit
GCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCGC230.166848023213638No Hit
AGCTGCCTGACCCGCACGCCCAGGGACCCCTCTCTCCGCCCCCAGGCCCG210.15233949945593037No Hit
AGCTGCCTGACCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCGC200.14508523757707653No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCTG200.14508523757707653No Hit
AGCTGCCTGACCCGCACTGGCAGTGGAGGCAGCCGCAAAGACCAAGTCTC170.12332245194051505No Hit
AGCTGCCTGACCCGCACGCCCGGGGCCCCCTCTCTCCGCCCCCAGGCCCG170.12332245194051505No Hit
AGCTGCCTGACCCGCACGTAGCAGTGGAGGCAGCCGCAAAGACCCAGTCT160.11606819006166123No Hit
AGCTGCCTGACTCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG150.1088139281828074No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCTCCAGGCCCG150.1088139281828074No Hit
AGCTGCCTGACCCGCACGTAGCAGTGGAGGCAGCCGCAACGACCAAGTCT150.1088139281828074No Hit
AGCTGCCTGACCCGCACGGTCTTGGCAGTGGAGGCAGCCGCAAAGACCAA150.1088139281828074No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCA150.1088139281828074No Hit
AGCTGCCTGACCCGCACGCCCAGGGCTCCCTCTCTCCGCCCCCAGGCCCG140.10155966630395358No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCCCCGCCCCCAGGCCCG140.10155966630395358No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGTCCCCAGGCCCG140.10155966630395358No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)