FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002869278

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002869278
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13785
Sequences flagged as poor quality0
Sequence length154
%GC69

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC1105980.22488211824447No Hit
TTGCGGCTGCCTCCACTGCCCAGGCAGCCAGGCCCCACTTTGCGGCTCTC5754.17120058034095No Hit
TTGCGGCTGCCTCCACTGCCAATACCGTGCGGGTCAGGCAGCTTGTAGAA1491.0808850199492201No Hit
TTGCGGCTGCCTCCACTGCCCCGGTAGCCAGGCCCCACTTTGCGGCTCTC1350.9793253536452665No Hit
TTGCGGCTGCCTCCACTGCTACGTGCGGGTCAGGCAGCTTGTAGAACCAT950.6891548784911136No Hit
TTGCGGCTGCCTCCACTGCAGAAATGTTGTGACGATGTCCCCGTGCGGGT750.544069640914037No Hit
TTGCGGCTGCCTCCACTGTTACGTGCGGGTCAGGCAGCTTGTAGAACCAT720.5223068552774754No Hit
TTGCGGCTGCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCG480.3482045701849837No Hit
TTGCGGCTGCCTCCACTGCCAATCCCGTGCGGGTCAGGCAGCTTGTAGAA420.30467899891186073No Hit
TTGCGGCTGCCTCCACTGCCAATACCGTGCGGGTCAGGCAGCTTGTCGAA410.29742473703300687No Hit
TTGCGGCTGCCTCCACTGCCAAGGTAGCCAGGCCCCACTTTGCGGCTCTC390.28291621327529926No Hit
TTGCGGCTGCCTCCACTGCCGAGGTAGCCAGGCCCCACTTTGCGGCTCTC390.28291621327529926No Hit
TTGCGGCTGCCTCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCG340.2466449038810301No Hit
TTGCGGCTGCCTCCACTGCCAGTGCGGGTCAGGCAGCTTGTAGAACCATG300.2176278563656148No Hit
TTGCGGCTGCCTCCACTGTCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC290.21037359448676096No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCCCTC280.20311933260790715No Hit
ATGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC270.19586507072905332No Hit
ATGCGGCTGCCTCCACTGCCCAGGCAGCCAGGCCCCACTTTGCGGCTCTC240.17410228509249184No Hit
TTGCGGCTGCCTCCACTGCAGAACTGTTGTGACGATGTCCCCGTGCGGGT240.17410228509249184No Hit
TTGCGGCTGCCTCCACTGCTCAGGTAGCCAGGCCCCACTTTGCGGCTCTC210.15233949945593037No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACCTTGCGGCTCTC190.1378309756982227No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGTCCCACTTTGCGGCTCTC190.1378309756982227No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCGGGCCCCACTTTGCGGCTCTC170.12332245194051505No Hit
TTGCGGCTGCCTCCACTGCCCCGGCAGCCAGGCCCCACTTTGCGGCTCTC170.12332245194051505No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCCC160.11606819006166123No Hit
TTGCGGCTGCCTCCACTGCCCAGGTCGCCAGGCCCCACTTTGCGGCTCTC150.1088139281828074No Hit
TTGCGGCTGCCTCCACTGCCCGGGTAGCCAGGCCCCACTTTGCGGCTCTC150.1088139281828074No Hit
TTGCTGCTGCCTCCACTGCCCCGGTAGCCAGGCCCCACTTTGCGGCTCTC140.10155966630395358No Hit
TTGCGGCTGCCTCCACTGCCTAGGTAGCCAGGCCCCACTTTGCGGCTCTC140.10155966630395358No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)