FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002869280

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002869280
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15466
Sequences flagged as poor quality0
Sequence length154
%GC67

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC1073269.39092202250097No Hit
TTGCGGCTGCCTCCACTGCCCAGGCAGCCAGGCCCCACTTTGCGGCTCTC6284.060519849993534No Hit
TTGCGGCTGCCTCCACTGCCAATACCGTGCGGGTCAGGCAGCTTGTAGAA3011.9462045777835253No Hit
TTGCGGCTGCCTCCACTGCTCGCCCTTCAGCCTGGACCGCCCCCCTCCAC1781.1509116772274668No Hit
TTGCGGCTGCCTCCACTGCTCCGTGCGGGTCAGGCAGCTTGTAGAACCAT1561.0086641665589033No Hit
TTGCGGCTGCCTCCACTGCCCCGGTAGCCAGGCCCCACTTTGCGGCTCTC1140.7371007371007371No Hit
TTGCGGCTGCCTCCACTGCTCTGCCTGTCACCTCAGCCCACGGACCGTGC1090.7047717574033363No Hit
TTGCGGCTGCCTCCACTGCCCCAAGCCCCTCTCTCTGGCCCAACCTGTTC1030.6659769817664555No Hit
TTGCGGCTGCCTCCACTGCGGAGGATCCACTCCACAGGGGTCACGTGCGG890.5754558386137334No Hit
TTGCGGCTGCCTCCACTGCGCACCTACGGCATGTTCTCCGTGGACCTCCG820.5301952670373723No Hit
TTGCGGCTGCCTCCACTGCACACGTGCGGGTCAGGCAGCTTGTAGAACCA810.5237294710978921No Hit
TTGCGGCTGCCTCCACTGCCAATACCGTGCGGGTCAGGCAGCTTGTCGAA700.45260571576361047No Hit
TTGCGGCTGCCTCCACTGCCGAGGGGAGCAAGAGTGGCCGCAGCTTTGAA640.41381094012672964No Hit
TTGCGGCTGCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCG570.36855036855036855No Hit
TTGCGGCTGCCTCCACTGCCAATCCCGTGCGGGTCAGGCAGCTTGTAGAA570.36855036855036855No Hit
TTGCGGCTGCCTCCACTGGGTGGCCTGGGGGGCCCCTGGGTGGCCGTGCG500.3232897969740075No Hit
TTGCGGCTGCCTCCACTGCGTGCGGGTCAGGCAGCTTGTAGAACCATGTC490.31682400103452735No Hit
TTGCGGCTGCCTCCACTGCGACACGACCTTCTGTGTAGCGGGCGTCGGGT430.27802922539764646No Hit
TTGCGGCTGCCTCCACTGCCACCAGAACCTCGTGCGGGTCAGGCAGCTTG400.258631837579206No Hit
TTGCGGCTGCCTCCACTGCCGAGGTAGCCAGGCCCCACTTTGCGGCTCTC390.25216604163972584No Hit
TTGCGGCTGCCTCCACTGCCCCACGCCCCTCTCTCTGGCCCAACCTGTTC380.2457002457002457No Hit
TTGCGGCTGCCTCCACTGCCCCGTCTCCAAGATGGAGGCAAAGAATTCCT370.23923444976076555No Hit
TTGCGGCTGCCTCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCG370.23923444976076555No Hit
TTGCGGCTGCCTCCACTGCCAGGCCTGGGCGGTTCTCGTGCCGTGCGGGT350.22630285788180524No Hit
TTGCGGCTGCCTCCACTGCCATCTTCCCATGAGCCCAGGCTGGAGATGTA330.21337126600284498No Hit
TTGCGGCTGCCTCCACTGCCAGTCAGGGAGGCCCAGACTCCTATCTAGTC330.21337126600284498No Hit
TTGCGGCTGCCTCCACTGTCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC290.18750808224492435No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCGGGCCCCACTTTGCGGCTCTC270.17457649036596407No Hit
TTGCGGCTGCCTCCACTGCCAAGGTAGCCAGGCCCCACTTTGCGGCTCTC270.17457649036596407No Hit
TTGCGGCTGCCTCCACTGCCAATCCCGTGCGGGTCAGGCAGCTTGTCGAA260.1681106944264839No Hit
TTGCGGCTGCCTCCACTGCCTAGGTAGCCAGGCCCCACTTTGCGGCTCTC260.1681106944264839No Hit
TTGCGGCTGCCTCCACTGCACCAAAGAAAATTATATTCCCCGTGCGGGTC250.16164489848700375No Hit
TTGCGGCTGCCTCCACTGCGATCTCAAGAGGTCCTCGCGGTCGCTTAGCC250.16164489848700375No Hit
TTGCGGCTGCCTCCACTGCACACGTGCGGGTCAGGCAGCTTGTAGACCCA250.16164489848700375No Hit
TTGCGGCTGCCTCCACTGCGGGCGCCCGGGGCGGCCGCGACAACCCCACC230.14871330660804347No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCCCTC220.1422475106685633No Hit
TTGCGGCTGCCTCCACTGCACGCGGCCGCCCGGGGAGGCCACACAGAGGC220.1422475106685633No Hit
TTGCGGCTGCCTCCACTGCAGAAATGTTGTGACGATGTCCCCGTGCGGGT220.1422475106685633No Hit
TTGCGGCTGCCTCCACTGCACCTTGGAGCCCACTGAACGTGCGGGTCAGG210.13578171472908315No Hit
TTGCGGCTGCCTCCACTGCTCCCCGCCCGGGCCCGGAGCTCACCAACCAC200.129315918789603No Hit
TTGCGGCTGCCTCCACTGCCAGGCATGGGCGGTTCTCGTGCCGTGCGGGT190.12285012285012285No Hit
TTGCGGCTGCCTCCACTGCGCCCAGTCCCATCGACCACCCAAGGGCTGAG180.1163843269106427No Hit
TTGCGGCTGTCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC180.1163843269106427No Hit
TTGCGGCTGCCTCCACTGCGCCGGGAACGGCGGCGGGGGAGGCGGCGGCC160.10345273503168241No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCGCTTTGCGGCTCTC160.10345273503168241No Hit
TTGCGGCTGCCTCCACTGCTGGCATTGACCGTGTGATACACACATGATTC160.10345273503168241No Hit
TTGCGGTTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC160.10345273503168241No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)