FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002869287

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002869287
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15770
Sequences flagged as poor quality0
Sequence length154
%GC67

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG1087468.95370957514267No Hit
AGCTGCCTGACCCGCACGGCCACCGGCCCCACCTGCAGCTGCTCCGCGGA4152.631578947368421No Hit
AGCTGCCTGACCCGCACGGCACGAGAACCGCCCATGCCTGGCAGTGGAGG3652.314521242866202No Hit
CGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG2631.667723525681674No Hit
AGCTGCCTGACCCGCACGTGCCCACCCAGCTCCTCTCCCTGGGATTCCGC1911.211160431198478No Hit
AGCTGCCTGACCCGCACGGTCCGTGGGCTGAGGTGACAGGCAGAGCAGTG1721.0906785034876347No Hit
AGCTGCCTGACCCGCACGGCAGTGGAGGCAGCCGCAAAGACCAAGTCTCT1460.9258084971464806No Hit
AGCTGCCTGACCCGCACGGTCACGTAATGGCAGGCCCCTGGGGAGCCTTG1430.9067850348763475No Hit
AGCTGCCTGACCCGCACGATGCTCCGGGGTCTCGGCGAGGCACGCCAGGC1240.7863031071655041No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1220.7736207989854154No Hit
AGCTGCCTGACCCGCACGGCACGCGAACCGCCCATGCCTGGCAGTGGAGG1070.6785034876347495No Hit
AGCTGCCTGACCCGCACGGTATTGGCAGTGGAGGCAGCCGCAAAGACCAA1000.6341154090044389No Hit
AGCTGCCTGACCCGCACGTGCCCCCCCAGCTCCTCTCCCTGGGATTCCGC590.37412809131261887No Hit
AGCTGCCTGACCCGCACCTCCTAGGTCTTCTCGCAGTGGAGGCAGCCGCA580.36778693722257455No Hit
AGCTGCCTGACCCGCACGTGCCGTTTTCCAGGGGCAGTGGAGGCAGCCGC460.29169308814204187No Hit
AGCTGCCTGACCCGCACGTGTGGATGATGACAGCAGACTGGAGGGGCAGT460.29169308814204187No Hit
AGCTGCCTGACCCGCACGCCCAGGGCACCCTCTCTCCGCCCCCAGGCCCG420.2663284717818643No Hit
AGCTGCCTGACCCGCACGGCACGAGCACCGCCCATGCCTGGCAGTGGAGG400.2536461636017755No Hit
AGCTGCCTGACCCGCACGAGGTTCTGGTGGCAGTGGAGGCAGCCGCAAAG400.2536461636017755No Hit
AGCTGCCTGACCCGCACGTGACCCCTGTGGAGTGGATCCTCCGCAGTGGA370.23462270133164237No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCACCTCTCTCCGCCCCCAGGCCCG360.22828154724159797No Hit
AGCTGCCTGACCCGCACGCCAAGGGCCCCCTCTCTCCGCCCCCAGGCCCG280.17755231452124287No Hit
AGCTGCCTGACCCGCACGGCCAGCAGCAGCGGGCTGAAGCCATCCGTGTC270.1712111604311985No Hit
AGCTGCCTGACCCGCACGGTGCCCTCCAAGCATCTAGTGGACTTGGCTGC260.1648700063411541No Hit
AGCTGCCTGACCCGCACGTCTCCCTGTTTGTTGGCGGCCTGCCTCCCGGC260.1648700063411541No Hit
AGCTGCCTGACCCGCACGGTCCGTGGGCTGAGGTGACAGGCAGAGCCGTG260.1648700063411541No Hit
AGCTGCCTGACCCGCACGGCCCAGAGGACAAGGACCAGGCAGTGGAGGCA260.1648700063411541No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCTCAGGCCCG250.15852885225110971No Hit
GCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCGC250.15852885225110971No Hit
AGCTGCCTGACCCGCACGTGTGCAGTGGAGGCAGCCGCAAAGACCAAGTC240.1521876981610653No Hit
AGCTGCCTGACCCGCACCTCCTAGGTCTTCTCGCAGTGGCGGCAGCCGCA230.14584654407102093No Hit
AGCTGCCTGACCCGCACGGCCCGAGAACCGCCCATGCCTGGCAGTGGAGG230.14584654407102093No Hit
AGCTGCCTGACCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCGC230.14584654407102093No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCAAGGCCCG230.14584654407102093No Hit
AGCTGCCTGACCCGCACGTGCGCAGTAGTCAGCCCACCTGCTGGTACCTG220.13950538998097653No Hit
AGCTGCCTGACCCGCACGCCCAGGGACCCCTCTCTCCGCCCCCAGGCCCG220.13950538998097653No Hit
AGCTGCCTGACCCGCACGGGCTGAACGCAGTGGAGGCAGCCGCAAAGACC220.13950538998097653No Hit
AGCTGCCTGACCCGCACGATGCTCCGGGGTCTCGGCGAGGCACGCCCGGC210.13316423589093215No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCTG200.12682308180088775No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCTGCCCCCAGGCCCG200.12682308180088775No Hit
AGCTGCCTGACCCGCACAGTGGAGGCAGCCGCAAAGACCAAGTCTCTGCT190.12048192771084339No Hit
AGCTGCCTGACCCGCACGGCAGTGGAGGCAGCCGCAAAGCCCAAGTCTCT180.11414077362079898No Hit
AGCTGCCTGACCCGCACGCTGAGTGACCCGACGCCCGCTACACAGAAGGT180.11414077362079898No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCCCCGCCCCCAGGCCCG170.1077996195307546No Hit
AGCTGCCTGACCCGCACGTGACCCCTGTGGAGTGGATCCTCCGCCGTGGA160.10145846544071022No Hit
AGCTGCCTGACCCGCACGGCAGTGGCGGCAGCCGCAAAGACCAAGTCTCT160.10145846544071022No Hit
GGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG160.10145846544071022No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)