FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002869288

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002869288
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15770
Sequences flagged as poor quality0
Sequence length154
%GC66

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC1025165.00317057704503No Hit
TTGCGGCTGCCTCCACTGCCCAGGCAGCCAGGCCCCACTTTGCGGCTCTC6023.817374762206722No Hit
TTGCGGCTGCCTCCACTGCCAGGCATGGGCGGTTCTCGTGCCGTGCGGGT5953.772986683576411No Hit
TTGCGGCTGCCTCCACTGCGCACCTACGGCATGTTCTCCGTGGACCTCCG4162.6379201014584654No Hit
TTGCGGCTGCCTCCACTGCGGAATCCCAGGGAGAGGAGCTGGGTGGGCAC2441.5472415979708307No Hit
TTGCGGCTGCCTCCACTGCTCTGCCTGTCACCTCAGCCCACGGACCGTGC2091.3253012048192772No Hit
TTGCGGCTGCCTCCACTGCCGTGCGGGTCAGGCAGCTTGTAGAACCATGT1410.8941027266962587No Hit
TTGCGGCTGCCTCCACTGCCTCGTCTGTAAAATGGACGACACCAGAGGTC1250.7926442612555484No Hit
TTGCGGCTGCCTCCACTGCCCCAAGCCCCTCTCTCTGGCCCAACCTGTTC1250.7926442612555484No Hit
TTGCGGCTGCCTCCACTGCCCCGGTAGCCAGGCCCCACTTTGCGGCTCTC1030.653138871274572No Hit
TTGCGGCTGCCTCCACTGCCAATACCGTGCGGGTCAGGCAGCTTGTAGAA790.5009511731135067No Hit
TTGCGGCTGCCTCCACTGCCCCTGGAAAACGGCACGTGCGGGTCAGGCAG670.424857324032974No Hit
TTGCGGCTGCCTCCACTGCGAGAAGACCTAGGAGGTGCGGGTCAGGCAGC640.40583386176284086No Hit
TTGCGGCTGCCTCCACTGCCCCTCCAGTCTGCTGTCATCATCCACACGTG620.39315155358275206No Hit
TTGCGGCTGCCTCCACTGCGGAGGATCCACTCCACAGGGGTCACGTGCGG590.37412809131261887No Hit
TTGCGGCTGCCTCCACTGCCCCACGCCCCTCTCTCTGGCCCAACCTGTTC430.2726696258719087No Hit
TTGCGGCTGCCTCCACTGCCACCAGAACCTCGTGCGGGTCAGGCAGCTTG380.24096385542168677No Hit
TTGCGGCTGCCTCCACTGCACACGTGCGGGTCAGGCAGCTTGTAGAACCA370.23462270133164237No Hit
TTGCGGCTGCCTCCACTGTGCGGGTCAGGCAGCTTGTAGAACCATGTCGT370.23462270133164237No Hit
TTGCGGCTGCCTCCACTGCCAAGGTAGCCAGGCCCCACTTTGCGGCTCTC370.23462270133164237No Hit
TTGCGGCTGCCTCCACTGTCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC370.23462270133164237No Hit
TTGCGGCTGCCTCCACTGCCGTGCGGGTCAGGCAGCTTGTAGAACCCTGT350.22194039315155356No Hit
TTGCGGCTGCCTCCACTGCCGAGGTAGCCAGGCCCCACTTTGCGGCTCTC350.22194039315155356No Hit
TTGCGGCTGCCTCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCG330.2092580849714648No Hit
TTGCGGCTGCCTCCACTGCCTGGTCCTTGTCCTCTGGGCCGTGCGGGTCA320.20291693088142043No Hit
TTGCGGCTGCCTCCACTGCGACACGACCTTCTGTGTAGCGGGCGTCGGGT300.19023462270133165No Hit
TTGCGGCTGCCTCCACTGCCTCGTCTGTAAAATGGACGACCCCAGAGGTC300.19023462270133165No Hit
TTGCGGCTGCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCG290.18389346861128728No Hit
TTGCGGCTGCCTCCACTGCCTGCCGCTCGACCCTGCCCCGTGCCAGCAGC260.1648700063411541No Hit
TTGCGGCTGCCTCCACTGCCGCCAGTGTGCAGCCAAGTCCACTAGATGCT260.1648700063411541No Hit
TTGCGGCTGCCTCCACTGCGTTCAGCCCGTGCGGGTCAGGCAGCTTGTAG250.15852885225110971No Hit
TTGCGGCTGCCTCCACTGCTCAGGTAGCCAGGCCCCACTTTGCGGCTCTC220.13950538998097653No Hit
TTGCGGCTGCCTCCACTGCACGCGGCCGCCCGGGGAGGCCACACAGAGGC210.13316423589093215No Hit
TTGCGGCTGCCTCCACTGCCAATACCGTGCGGGTCAGGCAGCTTGTCGAA200.12682308180088775No Hit
TTGCGGCTGCCTCCACTGCGAGACGACCTAGGAGGTGCGGGTCAGGCAGC200.12682308180088775No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCGGGCCCCACTTTGCGGCTCTC190.12048192771084339No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTCGCGGCTCTC190.12048192771084339No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACCTTGCGGCTCTC190.12048192771084339No Hit
TTGCGGCTGCCTCCACTGCGATGACCGGCCTGGGATTCCTGCCTTCTAGT190.12048192771084339No Hit
TTGCGGCTGCCTCCACTGCGAATGCGTGCGGGTCAGGCAGCTTGTAGAAC190.12048192771084339No Hit
TTGCGGCTGCCTCCACTGCCAATCCCGTGCGGGTCAGGCAGCTTGTAGAA190.12048192771084339No Hit
TTGCGGCTGCCTCCACTGCCGTGCGGGTCAGGCAGCTTGTCGAACCATGT180.11414077362079898No Hit
TTGCGGCTGCCTCCACGGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC170.1077996195307546No Hit
TTGCGGCTGCCTCCACTGCCCGGGTAGCCAGGCCCCACTTTGCGGCTCTC170.1077996195307546No Hit
TTGCGGCTGCCTCCACTGCCTAGGTAGCCAGGCCCCACTTTGCGGCTCTC170.1077996195307546No Hit
GTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC160.10145846544071022No Hit
TTGCGGCTGCCTCCACTGCTGGCTGGGGGAGGAGGGATGCCAGCCTCCTG160.10145846544071022No Hit
TTGCGGCTGCCTCCACTGCCCAGGCCGCCAGGCCCCACTTTGCGGCTCTC160.10145846544071022No Hit
TTGCGGCTGCCTTCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC160.10145846544071022No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCGCTTTGCGGCTCTC160.10145846544071022No Hit
TTGCGGCTGCCTCCACTGCTCCGTGCGGGTCAGGCAGCTTGTAGAACCAT160.10145846544071022No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)