FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002869291

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002869291
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18836
Sequences flagged as poor quality0
Sequence length154
%GC67

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG1364072.41452537693777No Hit
CGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG4222.2403907411339987No Hit
AGCTGCCTGACCCGCACGGTCCGTGGGCTGAGGTGACAGGCAGAGCAGTG4052.1501380335527713No Hit
AGCTGCCTGACCCGCACGGAGCAGTGGAGGCAGCCGCAAAGACCAAGTCT3982.1129751539605013No Hit
AGCTGCCTGACCCGCACGGTATTGGCAGTGGAGGCAGCCGCAAAGACCAA2431.2900828201316628No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1390.7379486090465067No Hit
AGCTGCCTGACCCGCACGGTCACGTAATGGCAGGCCCCTGGGGAGCCTTG1320.7007857294542366No Hit
AGCTGCCTGACCCGCACGGAGCAGTGGAGGCAGCCGCAACGACCAAGTCT1240.6583138670630707No Hit
AGCTGCCTGACCCGCACGTTCAGTGGGCTCCAAGGTGCAGTGGAGGCAGC1160.6158420046719049No Hit
AGCTGCCTGACCCGCACGGAGCAGTGGAGGCAGCCGCAAAGACCCAGTCT1130.5999150562752177No Hit
AGCTGCCTGACCCGCACGCGGAAGTGGGGGAGGGAGGTGGAGGGGGGCGG1040.552134211085156No Hit
AGCTGCCTGACCCGCACGGGTGACAAGCTCAGTGCAGGGGCAGGGCATGC820.43533658950945No Hit
AGCTGCCTGACCCGCACGGGGCTGGGGAGCGTACCGCGGGCCTCTGCGTA770.4087916755149713No Hit
AGCTGCCTGACCCGCACGGCACGGAGCCAGCGGGGTGGGGTTGTCGCGGC700.3716287959227012No Hit
AGCTGCCTGACCCGCACGCAGGTGTTAACACAACATGGGGCACACAGCAG620.32915693353153536No Hit
AGCTGCCTGACCCGCACGGTGGTGAGGTGGTCTCAGGGTGACGGCCATCT620.32915693353153536No Hit
AGCTGCCTGACCCGCACGCTGGGGTCTGTCTTGTCTGGAGCAGTGGAGGC560.297303036738161No Hit
AGCTGCCTGACCCGCACGCCTCAGCCCTTGGGTGGTCGATGGGACTGGGC540.2866850711403695No Hit
AGCTGCCTGACCCGCACGCCCAGGGCACCCTCTCTCCGCCCCCAGGCCCG520.276067105542578No Hit
AGCTGCCTGACCCGCACGGTCCGTGGGCTGAGGTGACAGGCAGAGCCGTG520.276067105542578No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCACCTCTCTCCGCCCCCAGGCCCG520.276067105542578No Hit
AGCTGCCTGACCCGCACGGCCAGCAGCAGCGGGCTGAAGCCATCCGTGTC460.24421320874920366No Hit
AGCTGCCTGACCCGCACGGCCGTTGGGGAAGGGGTGCTTTTTGGCAGTGG440.23359524315141217No Hit
AGCTGCCTGACCCGCACGGGGAATATAATTTTCTTTGGTGCAGTGGAGGC390.20705032915693355No Hit
AGCTGCCTGACCCGCACGTCCAGCGTCTGCCCGCTGAAGTTCGTGGGCAG380.2017413463580378No Hit
AGCTGCCTGACCCGCACGGCCACCGGCCCCACCTGCAGCTGCTCCGCGGA370.19643236355914206No Hit
AGCTGCCTGACCCGCACGGAGCAGTGGAGGCAGCCGCAACGACCCAGTCT300.15926948396687196No Hit
GCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCGC290.15396050116797622No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCAAGGCCCG290.15396050116797622No Hit
AGCTGCCTGACCCGCACGCTGAGTGACCCGACGCCCGCTACACAGAAGGT260.138033552771289No Hit
AGCTGCCTGACCCGCACGATGCTCCGGGGTCTCGGCGAGGCACGCCAGGC240.12741558717349755No Hit
GGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG230.12210660437460183No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCCCCGCCCCCAGGCCCG220.11679762157570608No Hit
AGCTGCCTGACCCGCACGCGGAAGTGGGGGAGGGAGGTGGCGGGGGGCGG220.11679762157570608No Hit
AGCTGCCTGACCCGCACGCCCAGGGACCCCTCTCTCCGCCCCCAGGCCCG210.11148863877681037No Hit
AGCTGCCTGACCCGCACGGTCACGTCATGGCAGGCCCCTGGGGAGCCTTG210.11148863877681037No Hit
AGCTGCCTGACCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCGC210.11148863877681037No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCGGGCCCG190.1008706731790189No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCTG190.1008706731790189No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)