FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002869292

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002869292
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18836
Sequences flagged as poor quality0
Sequence length154
%GC67

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC1269767.40815459757911No Hit
TTGCGGCTGCCTCCACTGCCCAGGCAGCCAGGCCCCACTTTGCGGCTCTC8114.305585049904439No Hit
TTGCGGCTGCCTCCACTGCTCCGTGCGGGTCAGGCAGCTTGTAGAACCAT6973.7003610108303246No Hit
TTGCGGCTGCCTCCACTGCTCTGCCTGTCACCTCAGCCCACGGACCGTGC4752.5217668294754727No Hit
TTGCGGCTGCCTCCACTGCCAATACCGTGCGGGTCAGGCAGCTTGTAGAA1901.008706731790189No Hit
TTGCGGCTGCCTCCACTGCCCCGGTAGCCAGGCCCCACTTTGCGGCTCTC1510.8016564026332554No Hit
TTGCGGCTGCCTCCACTGCACCTTGGAGCCCACTGAACGTGCGGGTCAGG1220.6476959014652793No Hit
TTGCGGCTGCCTCCACTGCTCGCCCTTCAGCCTGGACCGCCCCCCTCCAC1150.6105330218730092No Hit
TTGCGGCTGCCTCCACTGCCCCAAGCCCCTCTCTCTGGCCCAACCTGTTC1100.5839881078785305No Hit
TTGCGGCTGCCTCCACTGCCCTTGCAGATGGCCGTCACCCTGAGACCACC890.47249946910172014No Hit
TTGCGGCTGCCTCCACTGCCCAGATGGCGCATGCCCTGCCCCTGCACTGA820.43533658950945No Hit
TTGCGGCTGCCTCCACTGCGGGCGCCCGGGGCGGCCGCGACAACCCCACC780.4141006583138671No Hit
TTGCGGCTGCCTCCACTGCTGTGTGCCCCATGTTGTGTTAACACCTGCGT660.3503928647271183No Hit
TTGCGGCTGCCTCCACTGCTCCAGACAAGACAGACCCCAGCGTGCGGGTC650.3450838819282226No Hit
TTGCGGCTGCCTCCACTGCGATCTCAAGAGGTCCTCGCGGTCGCTTAGCC620.32915693353153536No Hit
TTGCGGCTGCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCG560.297303036738161No Hit
TTGCGGCTGCCTCCACTGCCCCTGCTCCACTGCCAAAAAGCACCCCTTCC490.26014015714589084No Hit
TTGCGGCTGCCTCCACTGCCCCACGCCCCTCTCTCTGGCCCAACCTGTTC470.24952219154809938No Hit
TTGCGGCTGCCTCCACTGCCGAGGTAGCCAGGCCCCACTTTGCGGCTCTC440.23359524315141217No Hit
TTGCGGCTGCCTCCACTGCCAATACCGTGCGGGTCAGGCAGCTTGTCGAA410.217668294754725No Hit
TTGCGGCTGCCTCCACTGCACCAAAGAAAATTATATTCCCCGTGCGGGTC380.2017413463580378No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCCCTC370.19643236355914206No Hit
TTGCGGCTGCCTCCACTGCTCAGGTAGCCAGGCCCCACTTTGCGGCTCTC360.19112338076024635No Hit
TTGCGGCTGCCTCCACTGCGCCCAGTCCCATCGACCACCCAAGGGCTGAG360.19112338076024635No Hit
TTGCGGCTGCCTCCACTGCGCACCTACGGCATGTTCTCCGTGGACCTCCG350.1858143979613506No Hit
TTGCGGCTGCCTCCACTGCGACACGACCTTCTGTGTAGCGGGCGTCGGGT350.1858143979613506No Hit
TTGCGGCTGCCTCCACTGCCAATCCCGTGCGGGTCAGGCAGCTTGTAGAA350.1858143979613506No Hit
TTGCGGCTGCCTCCACTGTCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC350.1858143979613506No Hit
TTGCGGCTGCCTCCACTGCCAAGGTAGCCAGGCCCCACTTTGCGGCTCTC340.18050541516245489No Hit
TTGCGGCTGCCTCCACTGCCCAGCTGGCGCATGCCCTGCCCCTGCACTGA300.15926948396687196No Hit
TTGCGGCTGCCTCCACTGCCCACGAACTTCAGCGGGCAGACGCTGGACGT290.15396050116797622No Hit
TTGCGGCTGCCTCCACTGCACGCGGCCGCCCGGGGAGGCCACACAGAGGC280.1486515183690805No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCGGGCCCCACTTTGCGGCTCTC260.138033552771289No Hit
TTGCGGCTGCCTCCACTGCCCGCGTGCGGGTCAGGCAGCTTGTAGAACCA260.138033552771289No Hit
TTGCGGCTGCCTCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCG250.1327245699723933No Hit
TTGCGGCTGCCTCCACTGCCTCGTCTGTAAAATGGACGACACCAGAGGTC240.12741558717349755No Hit
TTGCGGCTGCCTCCACTGCCCAGGGAGCCAGGCCCCACTTTGCGGCTCTC240.12741558717349755No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCCC210.11148863877681037No Hit
TTGCGGCTGCCTCCACTGCGGCTTCCTTCCCCCACTTCCTGGGTCTCCTC200.10617965597791462No Hit
TTGCGGCTGCCTCCACTGCGATCTCAAGAGGTCCTCGCGGTCGCTTCGCC190.1008706731790189No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)