FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002869294

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002869294
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13723
Sequences flagged as poor quality0
Sequence length154
%GC69

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC1069277.912992785834No Hit
TTGCGGCTGCCTCCACTGCCCAGGCAGCCAGGCCCCACTTTGCGGCTCTC7295.312249508125046No Hit
TTGCGGCTGCCTCCACTGCCCCGGTAGCCAGGCCCCACTTTGCGGCTCTC1391.0128980543612913No Hit
TTGCGGCTGCCTCCACTGCCAATACCGTGCGGGTCAGGCAGCTTGTAGAA930.6776943816949647No Hit
TTGCGGCTGCCTCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCG440.3206295999417037No Hit
TTGCGGCTGCCTCCACTGCTCTGCCTGTCACCTCAGCCCACGGACCGTGC420.3060555272170808No Hit
TTGCGGCTGCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCG360.2623333090432121No Hit
TTGCGGCTGCCTCCACTGCCGAGGTAGCCAGGCCCCACTTTGCGGCTCTC350.2550462726809007No Hit
TTGCGGCTGCCTCCACTGCCCCAAGCCCCTCTCTCTGGCCCAACCTGTTC340.24775923631858923No Hit
TTGCGGCTGCCTCCACTGCTCCGTGCGGGTCAGGCAGCTTGTAGAACCAT340.24775923631858923No Hit
TTGCGGCTGCCTCCACTGCCAAGGTAGCCAGGCCCCACTTTGCGGCTCTC300.21861109086934344No Hit
TTGCGGCTGCCTCCACTGCCTAGGTAGCCAGGCCCCACTTTGCGGCTCTC300.21861109086934344No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCCCTC270.19674998178240913No Hit
TTGCGGCTGCCTCCACTGCTCAGGTAGCCAGGCCCCACTTTGCGGCTCTC260.18946294542009764No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCCC240.17488887269547476No Hit
ATGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC240.17488887269547476No Hit
TTGCGGCTGCCTCCACTGCCAATACCGTGCGGGTCAGGCAGCTTGTCGAA230.1676018363331633No Hit
TTGCGGCTGCCTCCACTGCCCAGGTCGCCAGGCCCCACTTTGCGGCTCTC230.1676018363331633No Hit
TTGCGGCTGCCTCCACTGTCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC230.1676018363331633No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCGGGCCCCACTTTGCGGCTCTC220.16031479997085185No Hit
TTGCGGCTGCCTCCACTGCCCGGGTAGCCAGGCCCCACTTTGCGGCTCTC190.1384536908839175No Hit
TTGCGGCTGCCTCCACTGCCCAGGGAGCCAGGCCCCACTTTGCGGCTCTC180.13116665452160606No Hit
TTGCGGCTGCCTCCACTGCCAATCCCGTGCGGGTCAGGCAGCTTGTAGAA180.13116665452160606No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTCGCGGCTCTC170.12387961815929462No Hit
TTGCGGCTGCCTCCACTGCTCGCCCTTCAGCCTGGACCGCCCCCCTCCAC170.12387961815929462No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCGCTTTGCGGCTCTC170.12387961815929462No Hit
TTGCCGCTGCCTCCACTGCCCAGGCAGCCAGGCCCCACTTTGCGGCTCTC170.12387961815929462No Hit
TTGCGGCTGCCTCCACTGCCCAGGCCGCCAGGCCCCACTTTGCGGCTCTC160.11659258179698316No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACCTTGCGGCTCTC160.11659258179698316No Hit
TTGCCGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC140.10201850907236028No Hit
TTGCGGCTGCCTCCACTGCCCCACGCCCCTCTCTCTGGCCCAACCTGTTC140.10201850907236028No Hit
TTGCGGCTGCCTCCACTGCGCACCTACGGCATGTTCTCCGTGGACCTCCG140.10201850907236028No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)