FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002869297

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002869297
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16194
Sequences flagged as poor quality0
Sequence length154
%GC69

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG1364284.24107694207731No Hit
CGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG3552.192169939483759No Hit
AGCTGCCTGACCCGCACGGTATTGGCAGTGGAGGCAGCCGCAAAGACCAA2411.4882055082129184No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1200.7410151908114117No Hit
AGCTGCCTGACCCGCACGCTGGGGTCTGTCTTGTCTGGAGCAGTGGAGGC520.321106582684945No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCACCTCTCTCCGCCCCCAGGCCCG470.29023094973446956No Hit
AGCTGCCTGACCCGCACGCCCAGGGCACCCTCTCTCCGCCCCCAGGCCCG410.253180190193899No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCAAGGCCCG350.21612943065332837No Hit
AGCTGCCTGACCCGCACGCCAAGGGCCCCCTCTCTCCGCCCCCAGGCCCG350.21612943065332837No Hit
AGCTGCCTGACCCGCACGCCCAGGGACCCCTCTCTCCGCCCCCAGGCCCG320.19760405088304311No Hit
AGCTGCCTGACCCGCACGGGGAATATAATTTTCTTTGGTGCAGTGGAGGC300.1852537977028529No Hit
AGCTGCCTGACCCGCACGGGGACATCGTCACAACATTTCTGCAGTGGAGG280.1729035445226627No Hit
AGCTGCCTGACCCGCACGTTCAAAGCTGCGGCCACTCTTGCTCCCCTCGG270.16672841793256762No Hit
GCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCGC270.16672841793256762No Hit
AGCTGCCTGACCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCGC260.1605532913424725No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCTG230.14202791157218725No Hit
AGCTGCCTGACCCGCACGTAACAGTGGAGGCAGCCGCAAAGACCAAGTCT230.14202791157218725No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCGGGCCCG220.13585278498209213No Hit
AGCTGCTTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG210.12967765839199705No Hit
AGCTGCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCGC190.11732740521180685No Hit
AGCTGCCTGACCTGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG180.11115227862171174No Hit
AGCTGCCTGACCCGCACGCCCAGGGTCCCCTCTCTCCGCCCCCAGGCCCG180.11115227862171174No Hit
AGCTGTCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG180.11115227862171174No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCTCCTCTCTCCGCCCCCAGGCCCG170.10497715203161666No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)