FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002869299

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002869299
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21284
Sequences flagged as poor quality0
Sequence length154
%GC70

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG1851286.97613230595753No Hit
CGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG5292.4854350685961286No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1730.8128171396354069No Hit
AGCTGCCTGACCCGCACGCCCAGGGCACCCTCTCTCCGCCCCCAGGCCCG600.2819018981394475No Hit
AGCTGCCTGACCCGCACGCCCAGGGACCCCTCTCTCCGCCCCCAGGCCCG470.22082315354256718No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCACCTCTCTCCGCCCCCAGGCCCG470.22082315354256718No Hit
AGCTGCCTGACCCGCACGGTATTGGCAGTGGAGGCAGCCGCAAAGACCAA420.19733132869761325No Hit
AGCTGCCTGACCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCGC400.18793459875963164No Hit
AGCTGCCTGACCCGCACGCCAAGGGCCCCCTCTCTCCGCCCCCAGGCCCG400.18793459875963164No Hit
AGCTGCCTGACCCGCACGCCCGGGGCCCCCTCTCTCCGCCCCCAGGCCCG360.1691411388836685No Hit
GGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG350.16444277391467768No Hit
AGCTGCCTGACCCGCACGGGGACATCGTCACAACATTTCTGCAGTGGAGG340.1597444089456869No Hit
GCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCGC330.1550460439766961No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCAAGGCCCG310.14564931403871453No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCGGGCCCG290.13625258410073293No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCCCTCCGCCCCCAGGCCCG280.13155421913174217No Hit
AGCTGCCTGACTCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG280.13155421913174217No Hit
AGCTGCTTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG280.13155421913174217No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCAGGCCCGC270.12685585416275136No Hit
AGCTGCCTGACCCGCACGGGGAATATAATTTTCTTTGGTGCAGTGGAGGC260.12215748919376059No Hit
AGCTGCCTGACCCGCACGGAGGAGAGTGAGGCAGTGGAGGCAGCCGCAAA260.12215748919376059No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCCCCGCCCCCAGGCCCG240.11276075925577898No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCTG240.11276075925577898No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCTCCTCTCTCCGCCCCCAGGCCCG230.10806239428678821No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)