FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002869300

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002869300
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21284
Sequences flagged as poor quality0
Sequence length154
%GC70

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC1749382.18849840255591No Hit
TTGCGGCTGCCTCCACTGCCCAGGCAGCCAGGCCCCACTTTGCGGCTCTC10024.707761698928773No Hit
TTGCGGCTGCCTCCACTGCCCCGGTAGCCAGGCCCCACTTTGCGGCTCTC2161.0148468333020109No Hit
TTGCGGCTGCCTCCACTGCCGAGGTAGCCAGGCCCCACTTTGCGGCTCTC620.29129862807742907No Hit
TTGCGGCTGCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCG610.2866002631084383No Hit
TTGCGGCTGCCTCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCG520.24431497838752117No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCCC470.22082315354256718No Hit
TTGCGGCTGCCTCCACTGTCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC440.20672805863559482No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCGGGCCCCACTTTGCGGCTCTC430.20202969366660403No Hit
TTGCGGCTGCCTCCACTGCAGAAATGTTGTGACGATGTCCCCGTGCGGGT420.19733132869761325No Hit
TTGCGGCTGCCTCCACTGCCAAGGTAGCCAGGCCCCACTTTGCGGCTCTC400.18793459875963164No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCCCTC340.1597444089456869No Hit
TTGCGGCTGCCTCCACTGCTCAGGTAGCCAGGCCCCACTTTGCGGCTCTC340.1597444089456869No Hit
TTGCGGCTGCCTCCACTGCCAATACCGTGCGGGTCAGGCAGCTTGTAGAA330.1550460439766961No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCGCTTTGCGGCTCTC330.1550460439766961No Hit
TTGCGGCTGCCTCCACTGCCCGGGTAGCCAGGCCCCACTTTGCGGCTCTC330.1550460439766961No Hit
TTGCGGCTGCCTCCACTGCCTCACTCTCCTCCGTGCGGGTCAGGCAGCTT300.14095094906972375No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTCGCGGCTCTC300.14095094906972375No Hit
TTGCGGCTGCCTCCACTGCCCAGGCCGCCAGGCCCCACTTTGCGGCTCTC280.13155421913174217No Hit
TTGCGGCTGCCTCCACTGCCTAGGTAGCCAGGCCCCACTTTGCGGCTCTC280.13155421913174217No Hit
GTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC260.12215748919376059No Hit
TTGCGGCTGCCTCCACTGCCCAGGGAGCCAGGCCCCACTTTGCGGCTCTC260.12215748919376059No Hit
TTGCGGCTGTCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC260.12215748919376059No Hit
TTGCGGCTGCCTCCACTGCCCAGGTCGCCAGGCCCCACTTTGCGGCTCTC250.11745912422476978No Hit
TTGCGGCTGCCTCCACGGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC230.10806239428678821No Hit
TTGCGGCTGCCTCCATTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC230.10806239428678821No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)