FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002869302

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002869302
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14454
Sequences flagged as poor quality0
Sequence length154
%GC69

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC1144679.18915179189152No Hit
TTGCGGCTGCCTCCACTGCCCAGGCAGCCAGGCCCCACTTTGCGGCTCTC5353.7013975370139756No Hit
TTGCGGCTGCCTCCACTGCCAATACCGTGCGGGTCAGGCAGCTTGTAGAA2191.5151515151515151No Hit
TTGCGGCTGCCTCCACTGCCCCGGTAGCCAGGCCCCACTTTGCGGCTCTC1330.9201605092016051No Hit
TTGCGGCTGCCTCCACTGCGTGCGGGTCAGGCAGCTTGTAGAACCATGTC930.6434205064342051No Hit
TTGCGGCTGCCTCCACTGCCAATACCGTGCGGGTCAGGCAGCTTGTCGAA530.36668050366680505No Hit
TTGCGGCTGCCTCCACTGCCCTTGCAGATGGCCGTCACCCTGAGACCACC450.311332503113325No Hit
TTGCGGCTGCCTCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCG450.311332503113325No Hit
TTGCGGCTGCCTCCACTGCCGAGGTAGCCAGGCCCCACTTTGCGGCTCTC440.30441400304414No Hit
TTGCGGCTGCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCG410.28365850283658506No Hit
TTGCGGCTGCCTCCACTGCCAAGGTAGCCAGGCCCCACTTTGCGGCTCTC390.26982150269821503No Hit
TTGCGGCTGCCTCCACTGCCTAGGTAGCCAGGCCCCACTTTGCGGCTCTC390.26982150269821503No Hit
TTGCTGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC370.255984502559845No Hit
TTGCGGCTGCCTCCACTGCCAGGCATGGGCGGTTCTCGTGCCGTGCGGGT330.228310502283105No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCCCTC300.20755500207555005No Hit
TTGCGGCTGCCTCCACTGCCAATCCCGTGCGGGTCAGGCAGCTTGTAGAA290.20063650200636504No Hit
TTGCGGCTGCCTCCACTGCCCCAAGCCCCTCTCTCTGGCCCAACCTGTTC280.19371800193718No Hit
TTGCGGCTGCCTCCACTGCGCACCTACGGCATGTTCTCCGTGGACCTCCG280.19371800193718No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCCC270.18679950186799502No Hit
TTGCGGCTGCCTCCACTGTCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC250.17296250172962502No Hit
TTGCGGCTGCCTCCACTGCTCCGTGCGGGTCAGGCAGCTTGTAGAACCAT240.16604400166044No Hit
TTGCGGCTGCCTCCACTGCCCGGGTAGCCAGGCCCCACTTTGCGGCTCTC220.15220700152207No Hit
TTGCTGCTGCCTCCACTGCCCCGGTAGCCAGGCCCCACTTTGCGGCTCTC210.14528850145288502No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCGGGCCCCACTTTGCGGCTCTC200.1383700013837No Hit
TTGCGGCTGCCTCCACTGCCCAGGTCGCCAGGCCCCACTTTGCGGCTCTC190.13145150131451502No Hit
TTGCGGCTGCCTCCACGGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC190.13145150131451502No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCGCTTTGCGGCTCTC190.13145150131451502No Hit
TTGCGGCTGCCTCCACTGCCCAGGGAGCCAGGCCCCACTTTGCGGCTCTC170.11761450117614501No Hit
TTGCGGCTGCCTCCATTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC170.11761450117614501No Hit
TTGCGGCTGCCTCCACTGCCAATCCCGTGCGGGTCAGGCAGCTTGTCGAA160.11069600110696No Hit
TTGCGGCTGCCTCCACTGCCCCGGCAGCCAGGCCCCACTTTGCGGCTCTC160.11069600110696No Hit
TTGCGGCTGCCTCCACTGCCAAGCTGGTGCACAGCCCTTCCCTTCCCCGT160.11069600110696No Hit
TTGCGGTTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC160.11069600110696No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)