FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002869304

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002869304
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17323
Sequences flagged as poor quality0
Sequence length154
%GC66

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC1218570.34001039080991No Hit
TTGCGGCTGCCTCCACTGCCCAGGCAGCCAGGCCCCACTTTGCGGCTCTC6793.919644403394331No Hit
TTGCGGCTGCCTCCACTGCGGTCCGTGCGGGTCAGGCAGCTTGTAGAACC5303.0595162500721584No Hit
TTGCGGCTGCCTCCACTGCACCTTGGAGCCCACTGAACGTGCGGGTCAGG1981.1429890896495989No Hit
TTGCGGCTGCCTCCACTGCTCCGTGCGGGTCAGGCAGCTTGTAGAACCAT1871.0794896957801767No Hit
TTGCGGCTGCCTCCACTGCGGTCCGTGCGGGTCAGGCAGCTTGTAGCACC1851.0679443514402818No Hit
TTGCGGCTGCCTCCACTGCCAATACCGTGCGGGTCAGGCAGCTTGTAGAA1831.0563990071003868No Hit
TTGCGGCTGCCTCCACTGCAGAAATGTTGTGACGATGTCCCCGTGCGGGT1640.9467182358713848No Hit
TTGCGGCTGCCTCCACTGCCCCGGTAGCCAGGCCCCACTTTGCGGCTCTC1520.8774461698320153No Hit
TTGCGGCTGCCTCCACTGCTCGCCCTTCAGCCTGGACCGCCCCCCTCCAC880.5079951509553773No Hit
TTGCGGCTGCCTCCACTGCTCTGCCTGTCACCTCAGCCCACGGACCGTGC690.3983143797263753No Hit
TTGCGGCTGCCTCCACTGCACCAAAGAAAATTATATTCCCCGTGCGGGTC630.3636783467066905No Hit
TTGCGGCTGCCTCCACTGCAGAACTGTTGTGACGATGTCCCCGTGCGGGT560.3232696415170583No Hit
TTGCGGCTGCCTCCACTGCCAATACCGTGCGGGTCAGGCAGCTTGTCGAA540.31172429717716327No Hit
TTGCGGCTGCCTCCACTGCGGGTACCTCGACCGACGTCAGTGCATCGACC470.271315591987531No Hit
TTGCGGCTGCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCG430.24822490330774116No Hit
TTGCGGCTGCCTCCACTGCCGAGGTAGCCAGGCCCCACTTTGCGGCTCTC410.2366795589678462No Hit
TTGCGGCTGCCTCCACTGCCAAGGTAGCCAGGCCCCACTTTGCGGCTCTC400.23090688679789872No Hit
TTGCGGCTGCCTCCACTGCGCACCTACGGCATGTTCTCCGTGGACCTCCG390.22513421462795127No Hit
TTGCGGCTGCCTCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCG350.20204352594816138No Hit
TTGCGGCTGCCTCCACTGCAGCCCCCGTGCGGGTCAGGCAGCTTGTAGAA340.19627085377821393No Hit
TTGCGGCTGCCTCCACTGCCAATCCCGTGCGGGTCAGGCAGCTTGTAGAA330.19049818160826645No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCCCTC310.17895283726837152No Hit
TTGCGGCTGCCTCCACTGCTGTAGAGTGGGCGTGCGGGTCAGGCAGCTTG270.15586214858858163No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCGGGCCCCACTTTGCGGCTCTC260.15008947641863418No Hit
TTGCGGCTGCCTCCACTGCGTGCGGGTCAGGCAGCTTGTAGAACCATGTC250.14431680424868673No Hit
TTGCGGCTGCCTCCACTGCTCAGGTAGCCAGGCCCCACTTTGCGGCTCTC250.14431680424868673No Hit
TTGCGGCTGCCTCCACTGCCCGGGTAGCCAGGCCCCACTTTGCGGCTCTC250.14431680424868673No Hit
TTGCCGCTGCCTCCACTGCCCAGGCAGCCAGGCCCCACTTTGCGGCTCTC240.13854413207873925No Hit
TTGCGGCTGCCTCCACTGCCCCAAGCCCCTCTCTCTGGCCCAACCTGTTC240.13854413207873925No Hit
TTGCGGCTGCCTCCACTGCCAGGCATGGGCGGTTCTCGTGCCGTGCGGGT230.13277145990879177No Hit
TTGCGGCTGCCTCCACTGCCCTATCTCCACATGGCTGCCTCCTTCTTGCC220.12699878773884432No Hit
TTGCGGCTGCCTCCACTGCCCGGAGCCGGCAGCCTCCCTCTCACTGCCCT220.12699878773884432No Hit
TTGCGGCTGCCTCCACTGCGGAGGATCCACTCCACAGGGGTCACGTGCGG220.12699878773884432No Hit
TTGCGGCTGCCTCCACTGCCTAGGTAGCCAGGCCCCACTTTGCGGCTCTC220.12699878773884432No Hit
TTGTGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC210.12122611556889686No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTCGCGGCTCTC210.12122611556889686No Hit
TTGCGGCTGCCTCCACTGTCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC210.12122611556889686No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCCC200.11545344339894936No Hit
TTGCGGCTGCCTCCACTGCCCAGGTCGCCAGGCCCCACTTTGCGGCTCTC200.11545344339894936No Hit
TTGCGGCTGTCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC200.11545344339894936No Hit
TTGCGGCTGCCTCCACTGCGACACGACCTTCTGTGTAGCGGGCGTCGGGT180.10390809905905445No Hit
TTGCGGCTGCCTCCACTGCGCCCAGTCCCATCGACCACCCAAGGGCTGAG180.10390809905905445No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)