FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002869307

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002869307
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20183
Sequences flagged as poor quality0
Sequence length154
%GC70

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG1765287.45974334836248No Hit
CGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG4682.3187831343209635No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1670.8274290244264975No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCACCTCTCTCCGCCCCCAGGCCCG670.331962542733984No Hit
AGCTGCCTGACCCGCACGGGGAATATAATTTTCTTTGGTGCAGTGGAGGC650.3220532131001338No Hit
AGCTGCCTGACCCGCACGCCCAGGGCACCCTCTCTCCGCCCCCAGGCCCG590.292325224198583No Hit
GCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCGC440.21800525194470596No Hit
AGCTGCCTGACCCGCACGCCCAGGGACCCCTCTCTCCGCCCCCAGGCCCG420.20809592231085566No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCAAGGCCCG350.17341326859237974No Hit
AGCTGCCTGACCCGCACGCCAAGGGCCCCCTCTCTCCGCCCCCAGGCCCG350.17341326859237974No Hit
AGCTGCCTGACCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCGC330.16350393895852947No Hit
AGCTGCCTGACCCGCACGGCCACCGGCCCCACCTGCAGCTGCTCCGCGGA290.14368527969082892No Hit
GGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG290.14368527969082892No Hit
AGCTGCTTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG260.1288212852400535No Hit
AGCTGCCTGACCCGCACGGTATTGGCAGTGGAGGCAGCCGCAAAGACCAA250.12386662042312838No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCA240.11891195560620324No Hit
AGCTGCCTGACCCGCACGGGGACATCGTCACAACATTTCTGCAGTGGAGG230.1139572907892781No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCCCCGCCCCCAGGCCCG220.10900262597235298No Hit
AGCTGCCTGACCCGCACGCCCGGGGCCCCCTCTCTCCGCCCCCAGGCCCG210.10404796115542783No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)