FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002869309

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002869309
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27575
Sequences flagged as poor quality0
Sequence length154
%GC66

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG1712262.092475067996375No Hit
AGCTGCCTGACCCGCACGGTATTGGCAGTGGAGGCAGCCGCAAAGACCAA5812.106980961015412No Hit
AGCTGCCTGACCCGCACGCTGGGGTCTGTCTTGTCTGGAGCAGTGGAGGC4961.798730734360834No Hit
CGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG4901.7769718948322757No Hit
AGCTGCCTGACCCGCACGGCCACCGGCCCCACCTGCAGCTGCTCCGCGGA4311.5630099728014504No Hit
AGCTGCCTGACCCGCACGCGGAAGTGGGGGAGGGAGGTGGAGGGGGGCGG3941.42883046237534No Hit
AGCTGCCTGACCCGCACGGTCACGTAATGGCAGGCCCCTGGGGAGCCTTG3321.2039891205802356No Hit
AGCTGCCTGACCCGCACGGTCCGTGGGCTGAGGTGACAGGCAGAGCAGTG3301.196736174070716No Hit
AGCTGCCTGACCCGCACGGAGGAGAGTGAGGCAGTGGAGGCAGCCGCAAA2320.841341795104261No Hit
AGCTGCCTGACCCGCACGGCACGAGAACCGCCCATGCCTGGCAGTGGAGG2020.7325475974614687No Hit
AGCTGCCTGACCCGCACGGAGCAGTGGAGGCAGCCGCAAAGACCAAGTCT1910.6926563916591115No Hit
AGCTGCCTGACCCGCACGGGGACATCGTCACAACATTTCTGCAGTGGAGG1900.6890299184043517No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1860.6745240253853129No Hit
AGCTGCCTGACCCGCACGGGGCTGGGGAGCGTACCGCGGGCCTCTGCGTA1790.6491387126019945No Hit
AGCTGCCTGACCCGCACGGCACGAGAACCGCCCAGGCCTGGCAGTGGAGG1660.6019945602901178No Hit
AGCTGCCTGACCCGCACGTGACCCCTGTGGAGTGGATCCTCCGCAGTGGA1470.5330915684496826No Hit
AGCTGCCTGACCCGCACGCGGAAGTGGGGGAGGGAGGTGGCGGGGGGCGG1170.4242973708068903No Hit
AGCTGCCTGACCCGCACGGCCAGCAGCAGCGGGCTGAAGCCATCCGTGTC1060.3844061650045331No Hit
AGCTGCCTGACCCGCACGGTGCCCTCCAAGCATCTAGTGGACTTGGCTGC1050.3807796917497734No Hit
AGCTGCCTGACCCGCACGCAGATCATTTTGTGCAGTGGAGGCAGCCGCAA970.35176790571169536No Hit
AGCTGCCTGACCCGCACGCTGAGTGACCCGACGCCCGCTACACAGAAGGT800.2901178603807797No Hit
AGCTGCCTGACCCGCACGCACTGCCGGGTGCAGTGGAGGCAGCCGCAAAG770.27923844061650044No Hit
AGCTGCCTGACCCGCACGCAGGAGCTGCCGGCGTGGAACCTGCGGGCTGC700.2538531278331822No Hit
AGCTGCCTGACCCGCACGCTGGGGTCTGTCTTGTCTGGAGCAGTGGCGGC680.24660018132366276No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCACCTCTCTCCGCCCCCAGGCCCG610.2212148685403445No Hit
AGCTGCCTGACCCGCACGGGGAATATAATTTTCTTTGGTGCAGTGGAGGC580.21033544877606525No Hit
AGCTGCCTGACCCGCACGGACCACGTCACCTTCTCTGGAGCTGCAGTGGA580.21033544877606525No Hit
AGCTGCCTGACCCGCACGCAGTGGAGGCAGCCGCAAAGACCAAGTCTCTG580.21033544877606525No Hit
AGCTGCCTGACCCGCACGGCCACTCAGTAACTTCCTGAAGGGCAGTGAGA580.21033544877606525No Hit
AGCTGCCTGACCCGCACGGCAGTGGAGGCAGCCGCAAAGACCAAGTCTCT580.21033544877606525No Hit
AGCTGCCTGACCCGCACGGCACGCGAACCGCCCAGGCCTGGCAGTGGAGG580.21033544877606525No Hit
AGCTGCCTGACCCGCACGGGGACCTCGTCACAACATTTCTGCAGTGGAGG550.19945602901178605No Hit
AGCTGCCTGACCCGCACGGAGCAGTGGAGGCAGCCGCAAAGACCCAGTCT530.19220308250226656No Hit
AGCTGCCTGACCCGCACGAGGTTCTGGTGGCAGTGGAGGCAGCCGCAAAG510.18495013599274707No Hit
AGCTGCCTGACCCGCACGGCACGGAGCCAGCGGGGTGGGGTTGTCGCGGC510.18495013599274707No Hit
AGCTGCCTGACCCGCACGTTCAAAGCTGCGGCCACTCTTGCTCCCCTCGG510.18495013599274707No Hit
AGCTGCCTGACCCGCACGGCACGCGAACCGCCCATGCCTGGCAGTGGAGG490.17769718948322755No Hit
AGCTGCCTGACCCGCACGGAGCAGTGGAGGCAGCCGCAACGACCAAGTCT480.17407071622846781No Hit
AGCTGCCTGACCCGCACGCCCAGGGCACCCTCTCTCCGCCCCCAGGCCCG470.17044424297370808No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCAAGGCCCG450.1631912964641886No Hit
AGCTGCCTGACCCGCACGTGACCCCTGTGGAGTGGATCCTCCGCCGTGGA450.1631912964641886No Hit
AGCTGCCTGACCCGCACGTTCAGTGGGCTCCAAGGTGCAGTGGAGGCAGC450.1631912964641886No Hit
AGCTGCCTGACCCGCACGGTTGACGTCTACTGTGAGTGCAGTGGAGGCAG420.15231187669990934No Hit
AGCTGCCTGACCCGCACGGTCACGTCATGGCAGGCCCCTGGGGAGCCTTG400.14505893019038985No Hit
AGCTGCCTGACCCGCACGGTCCGTGGGCTGAGGTGACAGGCAGAGCCGTG390.1414324569356301No Hit
AGCTGCCTGACCCGCACGGGCCCCACACACAGGGCGCAGCTCAGAGGCCG390.1414324569356301No Hit
GCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCGC390.1414324569356301No Hit
AGCTGCCTGACCCGCACGGTGCCCTCCAAGCATCTAGTGGCCTTGGCTGC370.1341795104261106No Hit
GGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG370.1341795104261106No Hit
AGCTGCCTGACCCGCACGCGCAGGAACAAGGGTTCCCGTGCAGCCCGGGG360.13055303717135086No Hit
AGCTGCCTGACCCGCACGGTCTTGGCAGTGGAGGCAGCCGCAAAGACCAA360.13055303717135086No Hit
AGCTGCCTGACCCGCACGCGCGCGCCCACGACGGCATGACCCCGCTGCAC350.1269265639165911No Hit
AGCTGCCTGACCCGCACGCCCAGGGACCCCTCTCTCCGCCCCCAGGCCCG340.12330009066183138No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCAGGCCCGC310.11242067089755213No Hit
AGCTGCCTGACCCGCACGCCAAGGGCCCCCTCTCTCCGCCCCCAGGCCCG310.11242067089755213No Hit
AGCTGCCTGACCCGCACGCCTGAGGCTGACACAGGGCCTCACTCACCCTG290.10516772438803262No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCCCTCCGCCCCCAGGCCCG290.10516772438803262No Hit
AGCTGCCTGACCCGCACGGGGAGGAGATGCACCCCTTGCTGCAGGGGAAG280.1015412511332729No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)