FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002869310

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002869310
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27575
Sequences flagged as poor quality0
Sequence length154
%GC65

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC1584057.44333635539438No Hit
TTGCGGCTGCCTCCACTGCCCAGGCAGCCAGGCCCCACTTTGCGGCTCTC11374.123300090661831No Hit
TTGCGGCTGCCTCCACTGCTCCAGACAAGACAGACCCCAGCGTGCGGGTC5852.121486854034451No Hit
TTGCGGCTGCCTCCACTGCCAATACCGTGCGGGTCAGGCAGCTTGTAGAA4321.5666364460562106No Hit
TTGCGGCTGCCTCCACTGCGCACCTACGGCATGTTCTCCGTGGACCTCCG4321.5666364460562106No Hit
TTGCGGCTGCCTCCACTGCTCTGCCTGTCACCTCAGCCCACGGACCGTGC3881.4070716228467814No Hit
TTGCGGCTGCCTCCACTGCTCGCCCTTCAGCCTGGACCGCCCCCCTCCAC3261.1822302810516774No Hit
TTGCGGCTGCCTCCACTGCCAGGCATGGGCGGTTCTCGTGCCGTGCGGGT3021.0951949229374434No Hit
TTGCGGCTGCCTCCACTGCTCCGTGCGGGTCAGGCAGCTTGTAGAACCAT3021.0951949229374434No Hit
TTGCGGCTGCCTCCACTGCCCCAAGCCCCTCTCTCTGGCCCAACCTGTTC2961.0734360834088847No Hit
TTGCGGCTGCCTCCACTGCCAGGCCTGGGCGGTTCTCGTGCCGTGCGGGT2841.029918404351768No Hit
TTGCGGCTGCCTCCACTGCCTCACTCTCCTCCGTGCGGGTCAGGCAGCTT2450.8884859474161378No Hit
TTGCGGCTGCCTCCACTGCGGAGGATCCACTCCACAGGGGTCACGTGCGG2110.7651858567543065No Hit
TTGCGGCTGCCTCCACTGCAGAAATGTTGTGACGATGTCCCCGTGCGGGT2020.7325475974614687No Hit
TTGCGGCTGCCTCCACTGCCCCGGTAGCCAGGCCCCACTTTGCGGCTCTC1850.670897552130553No Hit
TTGCGGCTGCCTCCACTGCCTGCGGGGTGGCCCAGCTCCACTGCTCGCCC1800.6527651858567544No Hit
TTGCGGCTGCCTCCACTGCGATCTCAAGAGGTCCTCGCGGTCGCTTAGCC1350.48957388939256574No Hit
TTGCGGCTGCCTCCACTGCGACACGACCTTCTGTGTAGCGGGCGTCGGGT1220.442429737080689No Hit
TTGCGGCTGCCTCCACTGCACCCGGCAGTGCGTGCGGGTCAGGCAGCTTG1050.3807796917497734No Hit
TTGCGGCTGCCTCCACTGCCAATACCGTGCGGGTCAGGCAGCTTGTCGAA1040.3771532184950136No Hit
TTGCGGCTGCCTCCACTGCCGCCAGTGTGCAGCCAAGTCCACTAGATGCT980.3553943789664551No Hit
TTGCGGCTGCCTCCACTGCCAATCCCGTGCGGGTCAGGCAGCTTGTAGAA940.34088848594741616No Hit
TTGCGGCTGCCTCCACTGCCCCACGCCCCTCTCTCTGGCCCAACCTGTTC870.3155031731640979No Hit
TTGCGGCTGCCTCCACTGCAGCTCCAGAGAAGGTGACGTGGTCCGTGCGG740.2683590208522212No Hit
TTGCGGCTGCCTCCACTGCACGCGGCCGCCCGGGGAGGCCACACAGAGGC680.24660018132366276No Hit
TTGCGGCTGCCTCCACTGCAGAACTGTTGTGACGATGTCCCCGTGCGGGT660.23934723481414324No Hit
TTGCGGCTGCCTCCACTGCACAAAATGATCTGCGTGCGGGTCAGGCAGCT650.2357207615593835No Hit
TTGCTGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC620.22484134179510426No Hit
TTGCGGCTGCCTCCACTGCGTGCGGGTCAGGCAGCTTGTAGAACCATGTC600.21758839528558477No Hit
TTGCGGCTGCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCG600.21758839528558477No Hit
TTGCGGCTGCCTCCACTGCTCACTGCAGCCCGCAGGTTCCACGCCGGCAG600.21758839528558477No Hit
TTGCGGCTGCCTCCACTGCCCGGAGCCGGCAGCCTCCCTCTCACTGCCCT590.213961922030825No Hit
TTGCGGCTGCCTCCACTGCCGAGGGGAGCAAGAGTGGCCGCAGCTTTGAA560.2030825022665458No Hit
TTGCGGCTGCCTCCACTGCCGTGCGGGTCAGGCAGCTTGTAGAACCATGT550.19945602901178605No Hit
TTGCGGCTGCCTCCACTGCGGGCGCCCGGGGCGGCCGCGACAACCCCACC540.19582955575702632No Hit
TTGCGGCTGCCTCCACTGCACTCACAGTAGACGTCAACCGTGCGGGTCAG530.19220308250226656No Hit
TTGCGGCTGCCTCCACTGCCGAGGTAGCCAGGCCCCACTTTGCGGCTCTC510.18495013599274707No Hit
TTGCGGCTGCCTCCACTGCACCAAAGAAAATTATATTCCCCGTGCGGGTC500.1813236627379873No Hit
TTGCGGCTGCCTCCACTGCATCTCGGCCTCTGAGCTGCGCCCTGTGTGTG500.1813236627379873No Hit
TTGCGGCTGCCTCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCG500.1813236627379873No Hit
TTGCGGCTGCCTCCACTGCCACCAGAACCTCGTGCGGGTCAGGCAGCTTG490.17769718948322755No Hit
TTGCGGCTGCCTCCACTGCGATCTCAAGAGGTCCTCGCGGTCGCTTCGCC480.17407071622846781No Hit
TTGCGGCTGCCTCCACTGCCAAGGTAGCCAGGCCCCACTTTGCGGCTCTC460.16681776971894832No Hit
TTGCGGCTGCCTCCACTGCACCTTGGAGCCCACTGAACGTGCGGGTCAGG410.14868540344514958No Hit
TTGCGGCTGCCTCCACTGCTGTCAGGCACGGTAGCTGTAGCTCGTTCGCG400.14505893019038985No Hit
TTGCGGCTGCCTCCACTGCCCTTGCAGATGGCCGTCACCCTGAGACCACC380.13780598368087035No Hit
TTGCGGCTGCCTCCACTGTCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC370.1341795104261106No Hit
TTGCGGCTGCCTCCACTGCCAATCCCGTGCGGGTCAGGCAGCTTGTCGAA360.13055303717135086No Hit
TTGCGGCTGCCTCCACTGCTCCGATGGACAGTGGCCTCCCCGCCAGCTGG360.13055303717135086No Hit
TTGCGGCTGCCTCCACTGCGGGGGTTCTTCTGATTCAGGGTGAGTGAGGC360.13055303717135086No Hit
TTGCGGCTGCCTCCACTGTTACGTGCGGGTCAGGCAGCTTGTAGAACCAT360.13055303717135086No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCCC350.1269265639165911No Hit
TTGCGGCTGCCTCCACTGCTCCCCGCCCGGGCCCGGAGCTCACCAACCAC350.1269265639165911No Hit
TTGCGGCTGCCTCCACTGCGGCTTCCTTCCCCCACTTCCTGGGTCTCCTC320.11604714415231188No Hit
TTGCGGCTGCCTCCACTGCCTAGGTAGCCAGGCCCCACTTTGCGGCTCTC320.11604714415231188No Hit
TTGCGGCTGCCTCCACTGCGAGGCGCACTGTCAGCCCCACGTGCGGGTCA300.10879419764279238No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCGGGCCCCACTTTGCGGCTCTC290.10516772438803262No Hit
TTGCGGCTCCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC290.10516772438803262No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCCCTC280.1015412511332729No Hit
TTGCGGCTGCCTCCACTGCCCGGGTAGCCAGGCCCCACTTTGCGGCTCTC280.1015412511332729No Hit
TTGCGGCTGCCTCCACTGCTGCCCCGGCCCTGGCTTTGGGGCGTGCGGGT280.1015412511332729No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)