FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002869311

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002869311
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16718
Sequences flagged as poor quality0
Sequence length154
%GC66

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG1136367.96865653786338No Hit
AGCTGCCTGACCCGCACGGTATTGGCAGTGGAGGCAGCCGCAAAGACCAA12547.500897236511545No Hit
AGCTGCCTGACCCGCACGCCTCAGCCCTTGGGTGGTCGATGGGACTGGGC7314.372532599593253No Hit
CGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG2781.6628783347290348No Hit
AGCTGCCTGACCCGCACGCGGAAGTGGGGGAGGGAGGTGGAGGGGGGCGG1771.0587390836224428No Hit
AGCTGCCTGACCCGCACGTTGGGCAGAGGGGGCACGTACGGGGCTGGGAT1390.8314391673645174No Hit
AGCTGCCTGACCCGCACGGCCAGCAGCAGCGGGCTGAAGCCATCCGTGTC1250.7476970929537026No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1210.7237707859791841No Hit
AGCTGCCTGACCCGCACGGTCTTGGCAGTGGAGGCAGCCGCAAAGACCAA870.520397176695777No Hit
AGCTGCCTGACCCGCACGGGGAATATAATTTTCTTTGGTGCAGTGGAGGC580.346931451130518No Hit
AGCTGCCTGACCCGCACGCCTGAGGCTGACACAGGGCCTCACTCACCCTG560.33496829764325875No Hit
AGCTGCCTGACCCGCACGCGGAAGTGGGGGAGGGAGGTGGCGGGGGGCGG450.2691709534633329No Hit
AGCTGCCTGACCCGCACGCCAAGGGCCCCCTCTCTCCGCCCCCAGGCCCG450.2691709534633329No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCACCTCTCTCCGCCCCCAGGCCCG440.2631893767197033No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCAAGGCCCG360.21533676277066632No Hit
AGCTGCCTGACCCGCACGGTATTGGCCGTGGAGGCAGCCGCAAAGACCAA340.20337360928340711No Hit
AGCTGCCTGACCCGCACGCCCAGGGCACCCTCTCTCCGCCCCCAGGCCCG330.19739203253977747No Hit
CGCTGCCTGACCCGCACGGTATTGGCAGTGGAGGCAGCCGCAAAGACCAA320.19141045579614788No Hit
AGCTGCCTGACCCGCACGTTCAAAGCTGCGGCCACTCTTGCTCCCCTCGG310.18542887905251823No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCTG280.16748414882162938No Hit
AGCTGCCTGACCCGCACGGGGACATCGTCACAACATTTCTGCAGTGGAGG270.16150257207799976No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCCCCGCCCCCAGGCCCG270.16150257207799976No Hit
AGCTGCCTGACCCGCACGCGCGCGCCCACGACGGCATGACCCCGCTGCAC260.15552099533437014No Hit
GCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCGC260.15552099533437014No Hit
AGCTGCCTGACCCGCACGCCCGGGGCCCCCTCTCTCCGCCCCCAGGCCCG250.14953941859074052No Hit
GCACTCTGAACTAAACCTGAGCTCTCTGTCTTAGACCAAGTCTCTGCTAC240.1435578418471109No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCTCCAGGCCCG240.1435578418471109No Hit
AGCTGCCTGACCCGCACGCCCAGGGCTCCCTCTCTCCGCCCCCAGGCCCG230.13757626510348128No Hit
AGCTGCCTGACCCGCACGCCTAGGGCCCCCTCTCTCCGCCCCCAGGCCCG220.13159468835985166No Hit
AGCTGCCTGACCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCGC210.12561311161622205No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCGGGCCCG200.11963153487259241No Hit
GGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCCAGGCCCG200.11963153487259241No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCCCCAGGCCCGC190.1136499581289628No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTATCCGCCCCCAGGCCCG180.10766838138533316No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCTCCTCTCTCCGCCCCCAGGCCCG180.10766838138533316No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGTCCCCAGGCCCG180.10766838138533316No Hit
AGCTGCCTGACCCGCACGCCCAGGGCCCCCTCTCTCCGCTCCCAGGCCCG170.10168680464170356No Hit
AGCTGCCTGACCCGCACGGCAACGTCATTTAGCGACGCCTGCAGTGGAGG170.10168680464170356No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)