FastQCFastQC Report
Mon 5 Sep 2022
EGAF00002871760

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002871760
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17321990
Sequences flagged as poor quality0
Sequence length35-51
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC1201050.6933672170460784No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC359930.20778790427658714No Hit
TCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC332570.19199295231090655No Hit
TAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCA256020.14780057025780524No Hit
GCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC244280.14102305797428588No Hit
GGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGC240380.13877158455812524No Hit
AGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC237090.1368722646762872No Hit
CCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC203640.11756155037614038No Hit
AGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCA190460.10995272483126939No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)