FastQCFastQC Report
Mon 5 Sep 2022
EGAF00002871763

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002871763
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17156979
Sequences flagged as poor quality0
Sequence length35-51
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC321580.18743392994769068No Hit
GGGGGGGGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGG245800.14326531494851164No Hit
GGGGGGGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGC208160.12132672074728307No Hit
GGGGGGGGGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCG192980.11247900927080462No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)