FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002875004

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002875004
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences111823
Sequences flagged as poor quality0
Sequence length71
%GC39

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA14181.2680754406517443No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG4720.4220956332775905No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAG1970.17617127066882485No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)