FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002875738

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002875738
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2119
Sequences flagged as poor quality0
Sequence length71
%GC32

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA35316.658801321378007No Hit
GGCCTATTGCTATACCAATGATGTTGAGTGGCATTTTCTTTTTAGTTTTTCATTAAAATATATTCCATATC160.7550731477111845No Hit
ACCATATTCAAGGAAAAGAAAACAATATTTCAAATGGATTATTTCTGCTTAAAGTCATATGAAAGTTTAAT150.7078810759792354No Hit
GGGGCGATAGACACCGAGGATGAAGTGGGACCTTTAGCCCATCTTGCTCCAAGTCCTCAGAGTGAAGCTGT140.6606890042472865No Hit
AGCTTCAGCAGGGCAGAACCCTTCTCCAGATGTGTGTAACTTATGTCTTGAGTATCTGGGAGTAGTTGAAG140.6606890042472865No Hit
GCAGATTGCAGAATTCAAAGAAGCTTTTTCACTATTTGACAAAGATGGTGATGGAACTATAACAACAAAGG120.5663048607833885No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAG120.5663048607833885No Hit
GTGTGAGTCTGTATTTATTCTGCTTGGAATTTGTTGAGCTTCTTGGGTATGTAGATGAATGATTTTTTTTA120.5663048607833885No Hit
CATGAAATAGATCCACCTGCTTATTTTAAGCATATTAAAAAGGAAACTAATTGGACCATTTTCTATTTGTC110.5191127890514393No Hit
ACTGAAGTGAAGTGATGGACTCCGATTTGGAGAGTAGTAAGACGTGAAAGGAATACACTTGTGTTTAAGCA110.5191127890514393No Hit
GTTTAAAAAGTAGCAGGTACAATGAATATTGTCACAGATGTGTTAATTTTTGAAGCAATGTGGGTGCTGAC110.5191127890514393No Hit
CTTCCACAAAGAGCGTGCGCCTTGTCCAGCTCGAGTATGGCTTGCCATCCCTGCAGACTCTGTGCCGCCTA100.4719207173194903No Hit
GGAATTTAATGCAGAAGTACATCGGAAGCACATCATGGGCCAGAATGTTGCAGATTACATGCGCTACTTAA100.4719207173194903No Hit
CTATTTGGGATATGTATGGGTAGGGTAAATCAGTAAGAGGTGTTATTTGGAACCTTGTTTTGGACAGTTTA100.4719207173194903No Hit
CATCTGTAGAGACTGATTTGCAACCCTTCCGGGAAGCCATAGCTCTGCATGGTAAAGCCGTTTAAACATAT100.4719207173194903No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG100.4719207173194903No Hit
TTTTAATACATCTCATTAGTTTGCATCTTGCTAGGAAAAATACCGTCGCACTGTCCTGACAGTTACAGCAG100.4719207173194903No Hit
GATATGTATGGGTAGGGTAAATCAGTAAGAGGTGTTATTTGGAACCTTGTTTTGGACAGTTTACCAGTTGC100.4719207173194903No Hit
GAACAGAGTGTTCGATTCTGCCCTATTTATGTTTCTACTCGGGAACAAACGTTGGTTGTGTGTGTGTGTGT90.4247286455875413No Hit
ATGTGATTCTAAAAGCTTTTATTGAGCATTGTCAAATTTGTAAGCTTCATAGGGATGGACATCATATCTAT90.4247286455875413No Hit
GGACTCAACATACTAGTCACAGCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTCAC90.4247286455875413No Hit
GCTACATCCGATACTCCCAGATCTGTGCAAAAGCAGTGAGAGATGCACTGAAGACAGAATTCAAAGCAAAT90.4247286455875413No Hit
GTAAAGTGGTTGGTTGCAGTTGTGTAGTAGTTAAGGACTATGGCAAGGAGTCTCAGGCCAAGGATGTCATT90.4247286455875413No Hit
CTGTTTAGAAGAAGAAATGAAAGATCCAGTTTGGGATTATGAAATAAACCACAAATTAAAATTTTTGTTTA80.37753657385559225No Hit
CCTAAAGTGCTAGGATACAGGCATGAGCCACCGCGTTTCTCCCACTCCCCTCTTTTGCACTTTTTTCTCCC80.37753657385559225No Hit
CCGTCTGGCGGCATGTCGGCGTCAGATGAGCTGGACGACTCACAGGTGCGTCAGATGCTGTTCGACCTGGA80.37753657385559225No Hit
GGCTACACAATTGTTACACTTTATTCAGATTACAATTAATTAGAGTGATTATGAATTAGTGTTCTACACCA80.37753657385559225No Hit
GTGCGAGTAGTGACCCCAGCATACCTTGTCCTCTGGACCTCCTGTCTTCTCTGCTTCTGGGTGCATGGTAG80.37753657385559225No Hit
GGTTATGAAGCAGCAGTGTATTCAGCTGCATCTTCCTACTATCAACAGCAGCAGCAGCAACAGAAGCAGGC80.37753657385559225No Hit
TAAATTTGTAAGTTTCAGGTGACATGTGAAACCTTTTTTAAGATTTTTCTCAAAGTTTTGAAAAGCTATTA80.37753657385559225No Hit
GCACAGCTGGGAACCACGATCTACAAGGAATTTGAAAAGAGGAAGATGCTATGAAAGAAAAAAAAAATTCC80.37753657385559225No Hit
GGGATATGTGGAATTTTTAACAACAGTTAAATGGAAAAGCATAGACAATTACTGTAGACATGATAAAAGAA80.37753657385559225No Hit
ATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCT70.33034450212364325No Hit
TTAAAAAGATGAATCTAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA70.33034450212364325No Hit
GTTTAAAAGGAGGATGAGACTGAGTTTTTGTAGAGTTATAATTACATTCAAAATATACTTTTTTGCATTGA70.33034450212364325No Hit
GAAATGGGCTGGAATAAACTTTTGAAACACTAATGTAGTATGCTCCGTATAGTGATTGTAGCTGTTCCTCT60.28315243039169424No Hit
ATTGTACACTAGCTCAGCTCCACCAAACTACCTGTTCGTTCTCTTTTATTTGACATTGTTCACAGACTAGT60.28315243039169424No Hit
GCTTTCCAACATTTTTGTCATTGGCAATGGCAATAAACCTTGGATTTCCCTGCCCAGGGGAAAGGGCATTC60.28315243039169424No Hit
CGTTTGAGAAACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA60.28315243039169424No Hit
CTTGGTAAATACGGCATCATCTGCATGGAGGATTTGATTCATGAGATCTATACTGTTGGAAAACGCTTCAA60.28315243039169424No Hit
GTCAAGAGCCGAAGGAATTCAGATTGCCGAAAGACCATCATTTTGATATGATAAATATTAAGAGCATTCCC60.28315243039169424No Hit
CCCTTGAATTTAGGACCTGGTTAACCAGAAAGATAAGACTGTTCTTAACGACCTAGATGATTCTGTTCATC60.28315243039169424No Hit
GAGATCCGCCGTCACTGGGGTGGCAATGTCCTGGGTCCTAAGTCTGTGGCTCGTATCGCCAAGCTCGAAAA60.28315243039169424No Hit
GGCTTTCGCTCTAAGATTAAAAATGCCCTAGCCCACTTCTTACCACAAGGCACACCTACACCCCTTATCCC50.23596035865974516No Hit
GGCTGAAAATCACTATAACCATCAGTTACTGGTTTCAGTTGACAAAATATATAATGGTTTACTGCTGTCAT50.23596035865974516No Hit
GAAATGCAGCCTACACACCCAATTCGTCTTGGTCTGGCACTAAATTTCTCAGTCTTTTACTATGAGATTCT50.23596035865974516No Hit
GAACCATATAGACTAATGACAGCATCTGGGACACACGGACGTATCAAGTTCATGGTGGACATTCCTATTAT50.23596035865974516No Hit
GGCAAAAAGGTTTTAAAGACAAGCAAGTATTCAGAAAACTACAAAAAGTGCAGTATTGCAGAATGTATGTG50.23596035865974516No Hit
GTGCCACTACACTCCAGCCTTGTTGTCCAGCACTCCAGGCAACAAGAGCAAAACTCCATCTCAAAAAAAAA50.23596035865974516No Hit
GCTCAATATATAGTCCTGGAAATAGCAATTGAAACATGTCTTCTCACAAGAGAAAATGACAGTTTTAATGA50.23596035865974516No Hit
GGGCGTGGTGGTGGGCACCTGTAGTCCCAGCTACTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGA50.23596035865974516No Hit
CTGTTAAGGAAAGCTTTGCATATGTAGATATAGAAGAATAAGCTACGTAAATACTAAAGATATGTCATTCT50.23596035865974516No Hit
GCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTCACCCACCACATTAACAACATAAA40.18876828692779613No Hit
CTCAGTGCCTATGGGGGGTATGATGGTAAGGCAGTCCTTTGCCATTGGAGGCTCCGGGAGCTCCTACATCT40.18876828692779613No Hit
AGCTGCAGAGTGGGTGAGAAAGAGCCCAGAGGAGCGCCTTCCTCTCCTGCTGCCAGTCCTGGTTTTCAGGA40.18876828692779613No Hit
CAACTACGTGGCGTCCTGGAACATGAGCATGCTGCAGACCCAAGACCTCGTGAAGTCGGTCCAGGCCACGC40.18876828692779613No Hit
GACCTTTTATGACAAGGCAGTTTGAATAGGGACTATTGTAATACCCTCACACATTATAGGGGCACAGAGAA40.18876828692779613No Hit
GTTTCATTTTGTTTTGTTTTGTAAAAATGATAAAACTTCAGAAAATAAAATGTCAGTGTTGAATAAAAAAA40.18876828692779613No Hit
CCCCCTGCGGGGACCCGGAACTGATCTGACAGGATGGCATCTGATGACTTTGACATAGTGATTGAGGCCAT40.18876828692779613No Hit
GACTATGGCAAGGAGTCTCAGGCCAAGGATGTCATTGAAGAGTATTTCAAATGCAAGAAATGAAGAAATAA40.18876828692779613No Hit
GCTCCAGTGCTGGGGATTCGGACGGAGAGCGCGAGGACTCGGCGGCTGAGCGCGCCCGACAGCAGCTAGAG40.18876828692779613No Hit
GAATGGAAAGTTTGAAAAGCATTTGGATTTGGTTTGAAAGATGTTATTAGTGACTTTTGGCATCAATCACA40.18876828692779613No Hit
GTTTCACTACTCAGCATGGAAACAAGATGAAATTCCATTTGTAGGTAGTGAGACAAAATTGATGATCCATT40.18876828692779613No Hit
CTTAAAAACAGAAACTCATCTGTCCAAGTTCGTGGCAGAAAGGAACGTCCTTGTGAAGACCTTTATCTGAG40.18876828692779613No Hit
CACAAATATCCCACCATCCCCTTCATTATATTTTGGGATCTGCTAAAAAAAAAACTATGTTTCGGCAAAAG40.18876828692779613No Hit
TAGTTGTTTTGTAAATTGTCCCATAATCTGGATTTGTCTGTTTCCACATGATGAGATTCAAGGTAAGCATT40.18876828692779613No Hit
CATCCCAATACCAATTTAATTGATAAATATATAATCATTTGTTTTCAAATATTTATGTTGATACTTGCTTG40.18876828692779613No Hit
GTCCTAAGTTTTAATAAATTTTTACAGCCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.18876828692779613No Hit
GAGTATGACTCAGGAGATACAGATGAAATTATTGCGATGAAAAAAAATGTTGCTAAGGTCAAAAACAGTAC40.18876828692779613No Hit
GTGCATGCATGTTGGGGTTTCCTTTACCTTTTCTATAAGTTGTACCAAAACATCCACTTAAGTTCTTTGAT40.18876828692779613No Hit
CGGTGAAGGAGGAGACCAAGGAGGATGCTGAGGAGAAGCAATAAATCGTCTTATTTTATTTTCTTTTCCTC40.18876828692779613No Hit
GGAAGGGGTGAGCACAGAGTGCCTCTTACGGTAGTTAGGATGCTCAGTTGCTAAACACTGCGCTTTATTTT40.18876828692779613No Hit
ATTTCAAATGCAAGAAATGAAGAAATAAATCTTTGGCTCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.18876828692779613No Hit
GTTGTAGACACTGATCTGCTAGTGCTGTAATATTGTAAATACTGGACTCAGGAACTTTTGTTAGGAAAAAA40.18876828692779613No Hit
GCAACCAGCTAGCTACTCGAGAGCTTGGTGTAAAAATTGCCAAAGCAGTTGCCTGCCACAACTTTGTAAAA40.18876828692779613No Hit
GCACCTCCAGCTGCCCCCGGCCGGGGGATGCGAGGCTCGGAGCACCCTTGCCCGGCTGTGATTGCTGCCAG40.18876828692779613No Hit
TCCCTACACGACGCGGGTCCCTGCATTGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.18876828692779613No Hit
GCCTGCTGGCCGAGCGCCTGCGCATCAGCCCGGACAGGGTCTACATCAACTATTACGACATGAACGCGGCC40.18876828692779613No Hit
GCCTTTCATTAAATGTAACCTTTTGCTTTCCAAATTAAAGAACTCCATGCCACTCCTCAGAAAAAAAAAAA40.18876828692779613No Hit
CCCTATAGCACCCCCTCTACCCCCTCTAGAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.18876828692779613No Hit
TATTTACCCTATAGCACCCCCTCTACCCCCTCTAGAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.18876828692779613No Hit
CAGTATATGGATTCTATGAAAAATGTCCACAACACAGTAATTGGTCACTTGTTAAGAAAAATTTATCCTTG40.18876828692779613No Hit
GTATTTAAGCTGTGCTGTGGTGTGAGAATGTCATTCTTGATCTTCAGCCTTCGTTTGCAAGAAGAGTTCCA40.18876828692779613No Hit
CTATTTATACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.18876828692779613No Hit
CCCTTATTCCATGAAAGTTTTATAAAAGAAAAAATATATATATATTCATGTTTATTTAAGAAATGAAAAAA30.14157621519584712No Hit
CTTTATCTTCTATGAAGGGTCTGTAATGAAATCTCTAAATAATTTTTAAAAATTGTTCATCAACTTCTTTA30.14157621519584712No Hit
GGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAAT30.14157621519584712No Hit
CCGTGCCACCTATCACACCCCATCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14157621519584712No Hit
CTCTAGAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14157621519584712No Hit
GTTCGAGGCCAGCCTGGTCCACATGGGTCGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14157621519584712No Hit
TCTCACAACAGGCATTTTTACTGAAATACTAGGAATTTTTTCAATACAATCAGTTAGAAATACACACAAAT30.14157621519584712No Hit
GGCCTATTGCTATACCAATGATGTTGAGTGGCATTTTCTTTTTAGTTTTTCATTAAAATATATTCCATATA30.14157621519584712No Hit
GTTGTAACCTGCTGTGATACGATGCTTCAAGAGAAAATGCGGTTATAAAAAATGGTTCAGAATTAAACTTT30.14157621519584712No Hit
ATAAACGGTTTAGAGACTAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14157621519584712No Hit
GCTCAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14157621519584712No Hit
CCCGCCAGCTCCAGGACTGCCCCTTCCTGGGCCAACTAACCAGACAACTGGGAAGAGCCCCCAACTCCAAC30.14157621519584712No Hit
ATACAAAAGCTTCCTTAATTGAAGAAGATGAACCAGCTGAAAAAGAAAATTCCAGCAAAAAAAAAAAAAAA30.14157621519584712No Hit
AAATACTTGTGGAATGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14157621519584712No Hit
GGTAAAACCTTGTCTCTACTAAAAATACAAAAAAAATTAGCAGGGAGCGGTGGCAGGCGCCTGCAGGCCCA30.14157621519584712No Hit
GGTGTGCAGTGGTGCAATGTGGGCTTACTGCAGCCTTGACCTCCAGGACAAGTGATCTCCCACCTCAGCCT30.14157621519584712No Hit
GTACCATTCCTTCAAATAAAGAAATTTGGTACCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14157621519584712No Hit
CACAAGTGCTGCATATACTGGGTAGCAAAAGAAAATGGAAAAAAACCCACAAAACAAACTTTAAAAAAAAA30.14157621519584712No Hit
GTGTTAGTGGCTCTGACCTGGGGGCAGGAGCTGGCCAGCTCAGGCGTTCCCTGCTGCCACTGTCATTTGCC30.14157621519584712No Hit
GCTCATTCATTTCTCTAACAGCAGTAATATTAATAATTTTCATGATTTGAGAAGCCTTCGCTTCGAAGCGA30.14157621519584712No Hit
GTGCTGTCTCCATGTTTGATGTATCTGAGCAGGTTGCTCCACAGGTAGCTCTAGGAGGGCTGGCAACTTAG30.14157621519584712No Hit
GACCAGTAGACGCTCCTCTACTCTTTGAGACATCACTGGCCTATAATAAATGGGTTAATTTATGTAAAAAA30.14157621519584712No Hit
CTAATAATCTTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14157621519584712No Hit
CCCTCCAATAAACCTGATTCTGCTGCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14157621519584712No Hit
TATTGGATGTGATTCTAAAAGCTTTTATTGAGCATTGTCAAATTTGTAAGCTTCATAGGGATGGACATCAT30.14157621519584712No Hit
CACTATAACTTAACACTACGAGAGACTTAAAAAACAGTTACTGCAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14157621519584712No Hit
GTGCTGGGCGTCCTCTTCTTTGCCATAGCCTGCTTCTTATACAAGCCCCTGTCGGAGTCTTCAGATGGCCT30.14157621519584712No Hit

[OK]Adapter Content

Adapter graph