Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00002876021 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 606306 |
Total Bases | 43 Mbp |
Sequences flagged as poor quality | 0 |
Sequence length | 71 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 2654 | 0.43773276200466427 | No Hit |
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 1794 | 0.29589019406042494 | No Hit |
CTCCTAAGTAAAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCT | 732 | 0.12073111597114329 | Illumina Single End PCR Primer 1 (100% over 39bp) |
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATA | 649 | 0.10704165883233879 | No Hit |