FastQCFastQC Report
Wed 8 May 2024
EGAF00002876056

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002876056
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences840345
Total Bases59.6 Mbp
Sequences flagged as poor quality0
Sequence length71
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG55500.660443032326009No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA41380.49241680500270724No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)