FastQCFastQC Report
Fri 10 May 2024
EGAF00002876155

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002876155
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6300382
Total Bases447.3 Mbp
Sequences flagged as poor quality0
Sequence length71
%GC38

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG326890.5188415559564483No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA288250.45751194133942985No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)