FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002876290

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002876290
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23391
Sequences flagged as poor quality0
Sequence length71
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA7883.3688170663930572No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG670.2864349536146381No Hit
GCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTCACCCACCACATTAACAACATAAA290.12397930828096275No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAG270.11542901115813775No Hit
TTTGGAAATTTTGATGCTTGTATAAATGTCAGATAATTAATTTCCAAAGGCGTATGTATTAAGTAAAAGTC270.11542901115813775No Hit
GAGGAACAGCTCTTTGGACACTAGGAAAAAACCTTGTAGAGAGAGTAAAAAATTTAACACCCATAGTAGGC240.10260356547390022No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)