FastQCFastQC Report
Tue 7 May 2024
EGAF00002876610

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002876610
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1378
Total Bases97.8 kbp
Sequences flagged as poor quality0
Sequence length71
%GC30

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA32523.58490566037736No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG181.3062409288824384No Hit
ATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAG130.9433962264150944No Hit
CAGACTATAGACTATAAATATGTCTCCATCTGCCTTACCAAGTGTTTTCT100.7256894049346879No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATA80.5805515239477503No Hit
GGTCATGCTGTTGGTGATATTCCTGGAGTCCGCTTTAAGGTTGTCAAAGT70.5079825834542816No Hit
GCTGGAAAGCTGAAGTATTTCGATAAACTGAATTGAGAAATACTTCTTCA70.5079825834542816No Hit
GATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATACC70.5079825834542816No Hit
GCCCGGGAGACGGAGGTTGCAGTGAGCTGAGACGTTGTGACAGCACTCCA70.5079825834542816No Hit
CCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGC60.43541364296081275No Hit
GGATCATCAGGTCAGAAGTTCGAGACCAGCCTGACCAATATGGTGAGACC60.43541364296081275No Hit
GTCTTAAATAAAACTATTTAAAATTGGCAAAAAAAAAAAAAAAAAAAAAA60.43541364296081275No Hit
ATCTTGGCTCACTGCAACCTCCACTTTCCAGGTTCAAGCAATTCTTGTGC60.43541364296081275No Hit
GTAGCTTGGATCCTTGTGGGCATGATCCATAATCGGTTTCAAGGTAACGA60.43541364296081275No Hit
GTGGAGCAGAGGTGGAGAGAAATCGGGACTTGGCATTTTCTCCCTCTCTC50.36284470246734396No Hit
CCAACATTGGTTATGGAAGCAACAAAAAAACAAAGCACATGCTGCCCAGT50.36284470246734396No Hit
GGTAGAATAAACAATCATTGAATTTGAAGATAGATTGATAGAAATCACCC50.36284470246734396No Hit
GAGGAACAGCTCTTTGGACACTAGGAAAAAACCTTGTAGAGAGAGTAAAA50.36284470246734396No Hit
CAGCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTC50.36284470246734396No Hit
GGGCTGCCTCTCATCTAAAGCAAAACTACCTTCCTCACAGAAAACGCTTT50.36284470246734396No Hit
CCCGGACCCTGGGCATGGCTGAGGAGGATGAAGAGGAATGATTTGTCCTC50.36284470246734396No Hit
GTGACCAATGTGCCTCAATATCTTATTGTTCAACTTGACATTTTCTAGGA50.36284470246734396No Hit
GGTGAAACCCCGTCTCTACTAAAAACTACAAAAAAATTAGCTGGGTGCGG50.36284470246734396No Hit
CCCTACACGACGCGGGGGTTCCCAAAAAAAAAAAAAAAAAAAAAAAAAAA40.29027576197387517No Hit
GGAGTGGGGAGATGGATTTGGAATCAAATGCTCTTTTTTCTTCAGCCTTG40.29027576197387517No Hit
GCCTCCCCTGGATCATGTCATTCAATTCCAGTCACCTCTTCTGCAATCAT40.29027576197387517No Hit
CATTTTGGCATTCTTGCTGACTCTGACAGAGTGATTCTGATGGACTTGTA40.29027576197387517No Hit
GCACAAACGGTAGTTTTGTGTGTTGGCTGCTCCACTGTCCTCTGCCAGCC40.29027576197387517No Hit
GTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGT40.29027576197387517No Hit
ATGTTCCGGCGCAAGGCCTTCCTGCACTGGTACACGGGCGAGGGCATGGA40.29027576197387517No Hit
GGCTGAGGCAACTGGGTTACTTGAGATCAGGAGTTCTAGACCATCGTGGC40.29027576197387517No Hit
GGTTCAGTTTCATTCAGCTCTCTATGGACCAGTAATCTGATAAATAACCG40.29027576197387517No Hit
ATTATGCCTCTGGTTTAATTATTGGTGATTACACACTCTTTCTCTTACCC40.29027576197387517No Hit
ATGTTATTATATATTATACATACAGCATACATATAGAGTGAGAGAGCTGT40.29027576197387517No Hit
GCTGTGATTGCTGCCAGGCACTGTTTATCTCAGCTTTTCTGTCCTTTTGC40.29027576197387517No Hit
GAACTATTTTTTTTAAAGAAGTGATTTTCTTATTAAACAAGTACAAATTA40.29027576197387517No Hit
CTTGCTGAAAAGGTCAAGGCCTTCTTGGCTGATCCATCTGCCTTTGTGGC40.29027576197387517No Hit
CCCCATGTTATGGCTGATCAGTCATCCACCAGGAACGAAGATTTCCTGAA40.29027576197387517No Hit
GGAGTTCAAGACCAGCCTGGGCAATATGATGAAACTCCATCTCTACAAAA40.29027576197387517No Hit
GTATAGAACTCTTCTTGCAGTGGGTTGCTATTTTCTAGATTTTACTTTTT40.29027576197387517No Hit
GGCTGATGCCTGTAATCGCAGCACTTTGGGAGGACAAGGCTGAAGGATAG40.29027576197387517No Hit
CCCCGTCTCTACTAAAAATACAAAAAATTAGCCAGGCGTGGTGGCAGGAG40.29027576197387517No Hit
GAAGTAAAGACATGCGAGACTGGTGGCCTGCAAATAGCATCCGTCAATCT40.29027576197387517No Hit
GCAATAAAGTACAGTTCTCCCTGTGTTAAGATCCTAACCAGGGTTAAGGA40.29027576197387517No Hit
ACAGAACCCTCTAAATCCCCTTGTAAATTTAACTGTTAGTCCAAAGAGGA40.29027576197387517No Hit
AGGGTGGAGAGATTCAACCAGTTAGCGTGAAAGTTGGAGATAAAGTTCTT30.21770682148040638No Hit
GGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.21770682148040638No Hit
CCCTATAGCACCCCCTCTACCCCCTCTAGAGCCAAAAAAAAAAAAAAAAA30.21770682148040638No Hit
GGCAACATAGTGAGAGACCCCATCTCTACAAAAAAATTCAAAAATTAGTG30.21770682148040638No Hit
GCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTACGATAGCCCTTAT30.21770682148040638No Hit
GTTACTCACTTTGTGTAATCTGAAATCTAGCTGCTGAATACGCTGAAGTA30.21770682148040638No Hit
GTGTGGAGAAAGACCCCTAAGCCTAACAGAGATGAAGGTAGGCTGGGTCC30.21770682148040638No Hit
GGAATTGTGTGGGGTTTAGTGCTAAATACTTCAATAAAGTCTGTTTTTTG30.21770682148040638No Hit
CAGCATTTGGATGCACAGTACGACTGGTTTGACAGAAAGGTAAAAGACTA30.21770682148040638No Hit
GATGCGAGGCTGGAGCACCCTTGCCCGGCTGTGATTGCTGCCAGGCACTG30.21770682148040638No Hit
GCTCCCTGCAGTGAAAACACACTCTGAAGTGAGAAAGAAGCCAGTGTTTC30.21770682148040638No Hit
GCCACTTCCCATCAGGAGTCACTGCAAGGCCCCCAGGGTGGGATGGTGGG30.21770682148040638No Hit
ATATTAGCATTCCTTTCTCTTCTGTGATGGGACCCTTCAAAGCAAAAAAA30.21770682148040638No Hit
GGTGTAGAAGTTAAGGACATAGAATTGGTCATGTCACAAGCAAATGTGTC30.21770682148040638No Hit
CACAAGAGCACTGCAGTGTTTTTCATAATAAACTTGTGAACTAAAAAAAA30.21770682148040638No Hit
ACTCAGCATGGAAACAAGATGAAATTCCATTTGTAGGTAGTGAGACAAAA30.21770682148040638No Hit
GACTTTACAATAAAATGTCAATATGAAGGACTGTAATTCCTAGCAGTTTA30.21770682148040638No Hit
AGGGTGGTGGTCACGTGGCCCAGATTTATGCTATCCGTCAGTCCATCTCC30.21770682148040638No Hit
GTGACCTTCATTCTGCCTTGGATTGGCTCTGTTTAAACCTTTCAGATGAT30.21770682148040638No Hit
GAGGCAGGAGAATCGCTTGAACCCAGAAGGCAGAGATTGCCCTGAACCGA30.21770682148040638No Hit
GCTGGCGAGACTGTAGCCCCCTCCCACTCCCACACTCACTCTTGCAGAGC30.21770682148040638No Hit
GTGTCTGAGTCCTCTGACGTCCTGCCCAAGTGAACAGCTGCGGCAGCCCC30.21770682148040638No Hit
TCCTGGCTCCTTCACTGAACATGCCTAGTCCAACATTTTTTCCCAGTGAG30.21770682148040638No Hit
TTCCCTACACGACGCGGGCTGACAAAAAAAAAAAAAAAAAAAAAAAAAAA30.21770682148040638No Hit
CCCAGGAGGGGACCAGAGGGGATGCTGTGTCGCTGCCTGGGATCTTGGGG30.21770682148040638No Hit
CTCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.21770682148040638No Hit
CTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAAT30.21770682148040638No Hit
GGAAGAAAAACATGTCATGTAGGTTGTCTAAAAATAAAATGCATTTAAAC30.21770682148040638No Hit
GAAGTAGCTGCTTTTTAGCAATAGAATTGTTTCAGTATTTTGCTGCTGTT30.21770682148040638No Hit
GCTACAAAGTAAGCGCAAGTACCCACGTAAAGACGTTAGGTCAAGGTGTA20.14513788098693758No Hit
GTATAATTTGCCTTTTAACCTTTGATCTGTATCTTGCAATAGAATGGCTT20.14513788098693758No Hit
TATTGGTGCAGGTGCTGCAACAGTAGGAGTGGCTGGTTCTGGTGCTGGTA20.14513788098693758No Hit
TTCCCTACACGACGCTCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.14513788098693758No Hit
CGACGCGGGGTTAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.14513788098693758No Hit
AACCCGGGAGGTGGAGCTTCCAGTGAGCCGAGATTGCGCCACTGCACTCC20.14513788098693758No Hit
AGATAAAAGGTTTCTAAAACATGACGGAGGTTGAGATGAAGCTTCTTCAT20.14513788098693758No Hit
TCCATAATCCTTCTAATAGCTATCCTCTTCAACAATATACTCTCCGGACA20.14513788098693758No Hit
TCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACC20.14513788098693758No Hit
CTCATTCTGCCTGGGCGAGAAGGGCGAGACCCTGTCTACAAAAAAAAAAA20.14513788098693758No Hit
GAGTGGAATGGAGGGCCGCAAGAAAAAGTTTGAGAGCTGAGCCTTCCTGC20.14513788098693758No Hit
GGCTGGGCCCCGACGTTTGCGGCAGTGTTCCTTGTGCCCGTGGGGCCGGG20.14513788098693758No Hit
GTATTACCTTTCATCTGTGCCATGCTCTAGAACCTTGACCTTGATAGTTC20.14513788098693758No Hit
CACGACGCGGGGCTCCACCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.14513788098693758No Hit
ACACGACGCGGGGCCCCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.14513788098693758No Hit
GAGTTCAAGGTTGCAGTGAACTATGGTTACACCACTGCACTCTACTGTAC20.14513788098693758No Hit
ACCCTGGGCAACTTCGCCAAGGCCACCTTTGATGCCATTTCTAAGACCTA20.14513788098693758No Hit
GAGCTTGCAGTGAGCCGAGATCACGCTACTGCACTCCAGCCTAGGCAACA20.14513788098693758No Hit
GTATTTCATATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.14513788098693758No Hit
GAGATCATGCTGGCTGCAAAGAAGGGACTGGACCCATACAATGTACTGGC20.14513788098693758No Hit
CACCTATCCCCCATTCTCCTCCTATCCCTCAACCCCGACATCATTACCAA20.14513788098693758No Hit
CCTGGGCAGTGGGCTGGTCAGCCGGGTGTTCCCAGACAAAGAGGTCATGC20.14513788098693758No Hit
GATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCCACCCAGTACTCACA20.14513788098693758No Hit
GGTGTGGTGGCACACATCTGTAGTCCTGTAGTCTCAGCTACTCAGAAGGC20.14513788098693758No Hit
GAATGGCGTGAACCCAGGAGGCGGAGCTTGCAGTGAGCCAAGATCACGCC20.14513788098693758No Hit
TCCATCACCTACAAGCCCGTAAAGCATGGCCGGCCCGGCATCGGGGCCAC20.14513788098693758No Hit
GGGCAACAGCGAGACTCCATCTCAAAAAAAAAAAAAATTAGCCAGGCATG20.14513788098693758No Hit
GAGTTTGAGACCATGGCTGTTACAGGGATCATGTAAACTTGCTGTTTTTG20.14513788098693758No Hit
AACCCATCCCTGAGAATCCAAAATTCTCCGTGCCACCTATCACACCCCAT20.14513788098693758No Hit
GGTCAAAAAGAAACTTAGTGAAAGAAAATGTTTTGGGGTGAGGTATTGCT20.14513788098693758No Hit
ACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAACAA20.14513788098693758No Hit
CTTCAAATAGTGGCAAATAAAAAGTGCTATTTGTGAAAAAAAAAAAAAAA20.14513788098693758No Hit
TGTTTGAAGAGTTCCAAGTTGAAGGGAAACAAAGAAGTGTTTGATGGTGC20.14513788098693758No Hit
GTCAGATGAGGAACACCACTATCTTAATTTTGCGATACACTGCATTTGCT20.14513788098693758No Hit
TCCCTACACGACGCGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.14513788098693758No Hit
GACTTAGTAAAATATGGTAACAGTTCAAGGGATAGATATGCTACAACAGA20.14513788098693758No Hit
GTTTTGTCTTCACCCATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.14513788098693758No Hit
GCTTTTCTGTCCCTTTGCTCCCGGCAAGCGCTTCTGCTGAAAGTTCATAT20.14513788098693758No Hit
GATCTAAATTCAACAACCTAACATCACAATTAAAAGAACTAGAGAGCCAA20.14513788098693758No Hit
GACTTTCCTCTCTGCGAGCTTCTACTTCTAAGTCTGAATCCAGTCAGAAA20.14513788098693758No Hit
CACGACAACACATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.14513788098693758No Hit
GGAGATGCTGGCAACAGGGAGGACCAGATCAACAGGCTTATTAGAAGAAT20.14513788098693758No Hit
GAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.14513788098693758No Hit
GCTGTGGGCTCCCTGTCCCTGGGCAGGAGTGCTGGTGAGGAGGTGGAGCC20.14513788098693758No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)