FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002876610

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002876610
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1378
Sequences flagged as poor quality0
Sequence length71
%GC30

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30822.35123367198839No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG171.2336719883889695No Hit
ATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCT110.7982583454281567No Hit
CAGACTATAGACTATAAATATGTCTCCATCTGCCTTACCAAGTGTTTTCTTACTACAATGCTGAATGACTG100.7256894049346879No Hit
GGTCATGCTGTTGGTGATATTCCTGGAGTCCGCTTTAAGGTTGTCAAAGTAGCCAATGTTTCTCTTTTGGC70.5079825834542816No Hit
GCTGGAAAGCTGAAGTATTTCGATAAACTGAATTGAGAAATACTTCTTCAAGTTATGATGCTTGAAAGTTC70.5079825834542816No Hit
GCCCGGGAGACGGAGGTTGCAGTGAGCTGAGACGTTGTGACAGCACTCCAGCCTGAGCGACAAAGTGAAAT70.5079825834542816No Hit
GATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAACTA70.5079825834542816No Hit
GTAGCTTGGATCCTTGTGGGCATGATCCATAATCGGTTTCAAGGTAACGATGGTGTCGAGGTCTTTGGTGG60.43541364296081275No Hit
CCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGG60.43541364296081275No Hit
GTCTTAAATAAAACTATTTAAAATTGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA60.43541364296081275No Hit
CCAACATTGGTTATGGAAGCAACAAAAAAACAAAGCACATGCTGCCCAGTGGCTTCCGGAAGTTCCTGGTC50.36284470246734396No Hit
GTGGAGCAGAGGTGGAGAGAAATCGGGACTTGGCATTTTCTCCCTCTCTCTCTCCTAATTTGTTGGAGGCC50.36284470246734396No Hit
CAGCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTCACCCACCACATTAACAACATA50.36284470246734396No Hit
CCCGGACCCTGGGCATGGCTGAGGAGGATGAAGAGGAATGATTTGTCCTCACGCTCCCAAGACTGGTTTTT50.36284470246734396No Hit
GGTAGAATAAACAATCATTGAATTTGAAGATAGATTGATAGAAATCACCCAGTTTAAAAAATACAGAATAA50.36284470246734396No Hit
GGTGAAACCCCGTCTCTACTAAAAACTACAAAAAAATTAGCTGGGTGCGGTGGCAGGTGCCTGTAATCCCA50.36284470246734396No Hit
GTGACCAATGTGCCTCAATATCTTATTGTTCAACTTGACATTTTCTAGGACTGTACTTGATGAAAATGCCA50.36284470246734396No Hit
ATCTTGGCTCACTGCAACCTCCACTTTCCAGGTTCAAGCAATTCTTGTGCCTCACCCAGCTACTCAGGAGG50.36284470246734396No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAG40.29027576197387517No Hit
CCCTACACGACGCGGGGGTTCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.29027576197387517No Hit
GAGGAACAGCTCTTTGGACACTAGGAAAAAACCTTGTAGAGAGAGTAAAAAATTTAACACCCATAGTAGGC40.29027576197387517No Hit
GCAATAAAGTACAGTTCTCCCTGTGTTAAGATCCTAACCAGGGTTAAGGAAAAAAAAAAAAAAAAAAAAAA40.29027576197387517No Hit
CCCCGTCTCTACTAAAAATACAAAAAATTAGCCAGGCGTGGTGGCAGGAGCCTGTAATTCCAGCTATTCAG40.29027576197387517No Hit
GGCTGAGGCAACTGGGTTACTTGAGATCAGGAGTTCTAGACCATCGTGGCCTACATGGTGAAACCCCATCT40.29027576197387517No Hit
GGAGTGGGGAGATGGATTTGGAATCAAATGCTCTTTTTTCTTCAGCCTTGAAAGATGGAACTGAAGAACAA40.29027576197387517No Hit
ATGTTATTATATATTATACATACAGCATACATATAGAGTGAGAGAGCTGTGTACAGACACACAGCTGCTAA40.29027576197387517No Hit
GGGCTGCCTCTCATCTAAAGCAAAACTACCTTCCTCACAGAAAACGCTTTATTAGTGAACCTTGGGACCAT40.29027576197387517No Hit
GGAGTTCAAGACCAGCCTGGGCAATATGATGAAACTCCATCTCTACAAAAAATACAAAATTTAGCTAGGAA40.29027576197387517No Hit
GCACAAACGGTAGTTTTGTGTGTTGGCTGCTCCACTGTCCTCTGCCAGCCTACAGGAGGAAAAGCAAGGCT40.29027576197387517No Hit
ACAGAACCCTCTAAATCCCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCTCTTTGGACACTAGGA40.29027576197387517No Hit
CATTTTGGCATTCTTGCTGACTCTGACAGAGTGATTCTGATGGACTTGTATTTAAATTGTATGTGTTTTAC40.29027576197387517No Hit
GTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAATCTAGAGTTTATACAGTG40.29027576197387517No Hit
ATTATGCCTCTGGTTTAATTATTGGTGATTACACACTCTTTCTCTTACCCTTGTGTATTGAACTATGTCCA40.29027576197387517No Hit
GGTTCAGTTTCATTCAGCTCTCTATGGACCAGTAATCTGATAAATAACCGAGCTCTTCTTTGGGGATCAAT40.29027576197387517No Hit
GTATAGAACTCTTCTTGCAGTGGGTTGCTATTTTCTAGATTTTACTTTTTAGGGAACAAAATAAAATCCTT40.29027576197387517No Hit
GAACTATTTTTTTTAAAGAAGTGATTTTCTTATTAAACAAGTACAAATTAAAAAAAAAAAAAAAAAAAAAA40.29027576197387517No Hit
GAAGTAGCTGCTTTTTAGCAATAGAATTGTTTCAGTATTTTGCTGCTGTTTAATGCGCATCTTCAGAAAAC30.21770682148040638No Hit
GGATCATCAGGTCAGAAGTTCGAGACCAGCCTGACCAATATGGTGAGACCCTGTCTCTATTAAAAATACAA30.21770682148040638No Hit
GAGGCAGGAGAATCGCTTGAACCCAGAAGGCAGAGATTGCCCTGAACCGAGATCACACCATTGCACTCCAG30.21770682148040638No Hit
GCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTACGATAGCCCTTATGAAACTTAAGGGTCGAAGGTG30.21770682148040638No Hit
GGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.21770682148040638No Hit
TTCCCTACACGACGCGGGCTGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.21770682148040638No Hit
AGGGTGGTGGTCACGTGGCCCAGATTTATGCTATCCGTCAGTCCATCTCCAAAGCCCTGGTGGCCTATTAC30.21770682148040638No Hit
GGAAGAAAAACATGTCATGTAGGTTGTCTAAAAATAAAATGCATTTAAACTCAAAAAAAAAAAAAAAAAAA30.21770682148040638No Hit
GCCACTTCCCATCAGGAGTCACTGCAAGGCCCCCAGGGTGGGATGGTGGGGAGATAAGAACCGTGAGAGAA30.21770682148040638No Hit
CACAAGAGCACTGCAGTGTTTTTCATAATAAACTTGTGAACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.21770682148040638No Hit
CAGCATTTGGATGCACAGTACGACTGGTTTGACAGAAAGGTAAAAGACTATCTTCGCCACAGAGATGGAGA30.21770682148040638No Hit
GGCTGATGCCTGTAATCGCAGCACTTTGGGAGGACAAGGCTGAAGGATAGCTTGAACTCTGGAGTTCGAGC30.21770682148040638No Hit
CCCCATGTTATGGCTGATCAGTCATCCACCAGGAACGAAGATTTCCTGAAGAAGACCTGGTCCCTCTGGAG30.21770682148040638No Hit
GGTGTAGAAGTTAAGGACATAGAATTGGTCATGTCACAAGCAAATGTGTCGAGAGCAAAGGCAGTCCGAGC30.21770682148040638No Hit
AGGGTGGAGAGATTCAACCAGTTAGCGTGAAAGTTGGAGATAAAGTTCTTCTCCCAGAATATGGAGGCACC30.21770682148040638No Hit
GTGTCTGAGTCCTCTGACGTCCTGCCCAAGTGAACAGCTGCGGCAGCCCCTCCCAGCCTACCCCTCCTGCG30.21770682148040638No Hit
CTCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.21770682148040638No Hit
GCTGGCGAGACTGTAGCCCCCTCCCACTCCCACACTCACTCTTGCAGAGCCTGTGTCTTTAAGCAGCTGGC30.21770682148040638No Hit
GTGACCTTCATTCTGCCTTGGATTGGCTCTGTTTAAACCTTTCAGATGATGCACTTCCTGAAGGATTCAGT30.21770682148040638No Hit
GCTCCCTGCAGTGAAAACACACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCGCCCGATCCAGC30.21770682148040638No Hit
GATGCGAGGCTGGAGCACCCTTGCCCGGCTGTGATTGCTGCCAGGCACTGTTCATCTCAGCTTTTCTGTCC30.21770682148040638No Hit
GTTACTCACTTTGTGTAATCTGAAATCTAGCTGCTGAATACGCTGAAGTAAATCCTTGTTCACTGAAGTCT30.21770682148040638No Hit
GCCTCCCCTGGATCATGTCATTCAATTCCAGTCACCTCTTCTGCAATCATGACCTCTTGATGTCTCCATGG30.21770682148040638No Hit
GAAGTAAAGACATGCGAGACTGGTGGCCTGCAAATAGCATCCGTCAATCTGTGTTAACTGCATAGGGAGGG30.21770682148040638No Hit
ACTCAGCATGGAAACAAGATGAAATTCCATTTGTAGGTAGTGAGACAAAATTGATGATCCATTAAGTAAAC30.21770682148040638No Hit
GACTTTACAATAAAATGTCAATATGAAGGACTGTAATTCCTAGCAGTTTATTGAGAATTTCACTGGAAATG30.21770682148040638No Hit
CTTGCTGAAAAGGTCAAGGCCTTCTTGGCTGATCCATCTGCCTTTGTGGCTGCTGCCCCTGTGGCTGCTGC30.21770682148040638No Hit
GGCAACATAGTGAGAGACCCCATCTCTACAAAAAAATTCAAAAATTAGTGAGGTGTTGTGGTGTGGGCCTG30.21770682148040638No Hit
GGGCAACAGCGAGACTCCATCTCAAAAAAAAAAAAAATTAGCCAGGCATGGTGGCACATGCCTGCAGTCCC20.14513788098693758No Hit
CACGACAACACATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.14513788098693758No Hit
GTGTGGAGAAAGACCCCTAAGCCTAACAGAGATGAAGGTAGGCTGGGTCCAGACACGGCACCTACGGAGAG20.14513788098693758No Hit
GAGTTCAAGGTTGCAGTGAACTATGGTTACACCACTGCACTCTACTGTACTCTAGCTTGGGTGACAGAGTG20.14513788098693758No Hit
TCCATAATCCTTCTAATAGCTATCCTCTTCAACAATATACTCTCCGGACAATGAACCATGGCCAATACTAC20.14513788098693758No Hit
TCCTGGCTCCTTCACTGAACATGCCTAGTCCAACATTTTTTCCCAGTGAGTCACATCCTGGGATCCAGTGT20.14513788098693758No Hit
CACGACGCGGGGCTCCACCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.14513788098693758No Hit
GCTGTGGGCTCCCTGTCCCTGGGCAGGAGTGCTGGTGAGGAGGTGGAGCCTTTTGAGGGGGGCCTTCCCTC20.14513788098693758No Hit
TTCCCTACACGACGCTCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.14513788098693758No Hit
GAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.14513788098693758No Hit
GTCAGATGAGGAACACCACTATCTTAATTTTGCGATACACTGCATTTGCTGGTGCTATTTTTATACAGTGA20.14513788098693758No Hit
ACACGACGCGGGGCCCCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.14513788098693758No Hit
CTTCAAATAGTGGCAAATAAAAAGTGCTATTTGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.14513788098693758No Hit
GATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCCACCCAGTACTCACACCATCAAGTCTGTTATAGAGT20.14513788098693758No Hit
TCCCTACACGACGCGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.14513788098693758No Hit
GGCTGGGCCCCGACGTTTGCGGCAGTGTTCCTTGTGCCCGTGGGGCCGGGAGCGAGTAAAGTCTGGGCCAG20.14513788098693758No Hit
GTATAATTTGCCTTTTAACCTTTGATCTGTATCTTGCAATAGAATGGCTTTGGTTTTTTTCTTAGTAAATA20.14513788098693758No Hit
GGAATTGTGTGGGGTTTAGTGCTAAATACTTCAATAAAGTCTGTTTTTTGTGATTGGCTGAAAAAAAAAAA20.14513788098693758No Hit
GACTTTCCTCTCTGCGAGCTTCTACTTCTAAGTCTGAATCCAGTCAGAAATAAGATTTTTTGAGTAACAAA20.14513788098693758No Hit
TATTGGTGCAGGTGCTGCAACAGTAGGAGTGGCTGGTTCTGGTGCTGGTATTGGAACAGTCTTTGGCAGCC20.14513788098693758No Hit
GCTGTGATTGCTGCCAGGCACTGTTTATCTCAGCTTTTCTGTCCTTTTGCTCCCGGCAAGCGCTTCTGCTG20.14513788098693758No Hit
GGAGATGCTGGCAACAGGGAGGACCAGATCAACAGGCTTATTAGAAGAATGAACTAAGGTGTCTACCATGA20.14513788098693758No Hit
AGATAAAAGGTTTCTAAAACATGACGGAGGTTGAGATGAAGCTTCTTCATGGAGTAAAAAATGTATTTAAA20.14513788098693758No Hit
GCTTTTCTGTCCCTTTGCTCCCGGCAAGCGCTTCTGCTGAAAGTTCATATCTGGAGCCTGATGTCTTAACG20.14513788098693758No Hit
GAGATCATGCTGGCTGCAAAGAAGGGACTGGACCCATACAATGTACTGGCCCCAAAGGGAGCTTCAGGCAC20.14513788098693758No Hit
CTCATTCTGCCTGGGCGAGAAGGGCGAGACCCTGTCTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.14513788098693758No Hit
TGTTTGAAGAGTTCCAAGTTGAAGGGAAACAAAGAAGTGTTTGATGGTGCCAGAGAGGGGCTGCTCTCCAG20.14513788098693758No Hit
AACCCATCCCTGAGAATCCAAAATTCTCCGTGCCACCTATCACACCCCATCCTAAAAAAAAAAAAAAAAAA20.14513788098693758No Hit
TCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAGCACCCCCTCTACCCC20.14513788098693758No Hit
GAGTTTGAGACCATGGCTGTTACAGGGATCATGTAAACTTGCTGTTTTTGTTTTTTCCTGCCGGGTGTTGT20.14513788098693758No Hit
GGTCAAAAAGAAACTTAGTGAAAGAAAATGTTTTGGGGTGAGGTATTGCTTCTGTTTAGAAAGTAGTCTGT20.14513788098693758No Hit
CCTGGGCAGTGGGCTGGTCAGCCGGGTGTTCCCAGACAAAGAGGTCATGCTGGATGCTGCCTTAGCGCTGG20.14513788098693758No Hit
CCCTATAGCACCCCCTCTACCCCCTCTAGAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.14513788098693758No Hit
GGTGTGGTGGCACACATCTGTAGTCCTGTAGTCTCAGCTACTCAGAAGGCTGAGGTGGGAGGATTGATTGA20.14513788098693758No Hit
ATATTAGCATTCCTTTCTCTTCTGTGATGGGACCCTTCAAAGCAAAAAAAAGTCCTAATTAAAATTCTAGA20.14513788098693758No Hit
GAGCTTGCAGTGAGCCGAGATCACGCTACTGCACTCCAGCCTAGGCAACAGCGAGACTCCGTCTAAAAAAA20.14513788098693758No Hit
GACTTAGTAAAATATGGTAACAGTTCAAGGGATAGATATGCTACAACAGATACTACAAAAAAAAAAAAAAA20.14513788098693758No Hit
GATCTAAATTCAACAACCTAACATCACAATTAAAAGAACTAGAGAGCCAAGAGCAAACAAAAAAAAAAAAA20.14513788098693758No Hit
CACCTATCCCCCATTCTCCTCCTATCCCTCAACCCCGACATCATTACCAAATTTTCCTCTTAAAAAAAAAA20.14513788098693758No Hit
TCCATCACCTACAAGCCCGTAAAGCATGGCCGGCCCGGCATCGGGGCCACCCACTCCTCCCGCTTCATCCC20.14513788098693758No Hit
GTTTTGTCTTCACCCATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.14513788098693758No Hit
ATGTTCCGGCGCAAGGCCTTCCTGCACTGGTACACGGGCGAGGGCATGGACGAGATGGAGTTCACCGAGGC20.14513788098693758No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)