FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002876622

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002876622
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2098
Sequences flagged as poor quality0
Sequence length71
%GC30

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA41319.685414680648236No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG211.0009532888465205No Hit
ATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCT180.8579599618684461No Hit
GCTTGTGGACTTCACCCCAACAAAATTGTAAGCGTTGTTAGGTTTTTGTGTAAGATTCTTGCTGTAGCGTG100.47664442326024786No Hit
CACTAAGGAAATGCTGAAGCTTTTGGACTTCGGCAGTCTGTCCAACCTTCAGGTCACTCAGCCTACAGTTG100.47664442326024786No Hit
GGCTGGTCTCAAGCTAGTGAGCTCAAGTGATCCTCCTGCCTTGACAGGGTGCTATAATTACAGGTGTGAGC90.42897998093422307No Hit
GTTCAAGATCAGCCTGGCTAACATAGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGCATG90.42897998093422307No Hit
GGTACAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAAGCAGGCAAATTACCTGAGGTCAGGA70.3336510962821735No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAG60.2859866539561487No Hit
CTGTTTTACTATGATGTAAAAATTAGGTCATGTACATTTTCATATTAGACTTTTTGTTAAATAAACTTTTG60.2859866539561487No Hit
GTGTGCAGATATGTATTTATATTTGCCTTAACCTTCAAAATCTAGGGACATAAATCTTGTCTTTGTTAAAA60.2859866539561487No Hit
GGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA60.2859866539561487No Hit
GGTCCCAGCACCGATGGCATTCCCTTTGCCCTGAGTCTGCAGCGGGTCCCTTTTGTGCTTCCTTCCCCTCA60.2859866539561487No Hit
CTGTAACATTTGGGGGGTGGGACAGGGAGGAAAAGTAACAATAGTCCACATGTCCCTGGCATCTGTTCAGA60.2859866539561487No Hit
GTGTATTTGTTACTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA60.2859866539561487No Hit
GGATTAACTTCTGCCAGCTCAGACCATTTCCTAATCAGTTGAAAGGGAAACAAGTATTTCAGTCTCAAAAT60.2859866539561487No Hit
GTATCAGTATTTCCCATTGCTAGCCCGAATAATCAAGACCAGACTGTTTCTTGTCACTGGATTCTGGAAGC50.23832221163012393No Hit
GGTTTAAGCCTCATGATGATCCTGAGACTTGTCTTGTTGCTGCTCTGAGCATCTGGAGGAACAGAAAACTA50.23832221163012393No Hit
CCTGTCTCCTCCTGCAGGGCCCACCCTAAGAATGTATTTTTAAACACATGAAATAAGTATTTTTCACTAAA50.23832221163012393No Hit
GGTTTAAGGCAAACTGCCATCCTTAGTCCACAGTTTGAGGGTGGATTCTTTAAGGATCTAATAGAGGATGA50.23832221163012393No Hit
GGTTGATCTTTGCTGGGAAACAGCTGGAAGATGGACGCACCCTGTCTGACTACAACATCCAGAAAGAGTCC50.23832221163012393No Hit
CTGAAGTGGGGAGGATCACTTGAGCCCAGGAGGCAGAGATTGCAGTGAGCCGAGATCTTGCCATGCCACTG50.23832221163012393No Hit
CCAGAGGCTCCTACCCCAAAGATTTTCACAGAAACTTGAGGCCAGGTGCCGTGGCTCACACCTGTAATCTG50.23832221163012393No Hit
GCGACTTCTGAAGGGCCCCTTGCAAAGTAATAGGGCTTCTGCCTAAGCCTCTCCCTCCAGCCAATAGGCAG50.23832221163012393No Hit
ACTTTTAACCAGTGAAATTGACCTGCCCGTGAAGAGGCGGGCATAACACAGCAAGACGAGAAGACCCTATG40.19065776930409914No Hit
GCAAAGGGGATTTTGGGCAGGGTAATCCTGTAATTCCAGCACTTTGGGAGGCCAAGGCAGGTGGATCGCCT40.19065776930409914No Hit
GTTGTTAAGAGAGAGGACATTCAGCAGTTCTTTGAAGAGTTTCAGTCAAAAAAGAGAAGAAGAGTGGATGG40.19065776930409914No Hit
GGAATAATACTATCGCTATTCATTATAGCTACTCTCATAACCCTCAACACCCACTCCCTCTTAGCCAATAT40.19065776930409914No Hit
AGTCTAACCAACATGGAGAAACCCCGTCTCTACTAAAAACACAAAAATTAGCCAGGCTTGGTTGTGCATGC40.19065776930409914No Hit
CTCCCAAAGTGCTAGGATTACAGGTGTGAGCCACCGTGCCTGGCTGTGATGTAATTAAACTAAGGAGCTTC40.19065776930409914No Hit
CATAAAAGGGCATCAGAAAAATACAAAGACAACCCATCAATATCAGGAGCCTGAGCATGAGTTAAAGCATG40.19065776930409914No Hit
GTGGGATCGTTTCCAGATGAGAATTCACAAGCGACTCATTGACTTGCACAGTCCTTCTGAGATTGTTAAGC40.19065776930409914No Hit
ACGCGGGGCAGCATCCAGTTCATCTTAAGAATGTCAACGATTAGTCATGCAATAAATGTTCTGGTTTTAAA40.19065776930409914No Hit
CTGCTCCTGAATTAAAAACTGGTATCAGCGATGTTTTTGCTAAAAATGATCTTGCTGTTGTGGATGTCAGA40.19065776930409914No Hit
GCCCAGGAGTTCAAGACCAGCCTGGGCAACATGGTGAAACCCCCATCTCTACAAAAAAATACAAAAATTAT40.19065776930409914No Hit
GATGCTGGCAACAGGGAGGACCAGATCAACAGGCTTATTAGAAGAATGAACTAAGGTGTCTACCATGATTA40.19065776930409914No Hit
GAGTATCGCCCAAAAATCAAAGGAGAACATCCTGGCCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGA40.19065776930409914No Hit
CCGCTCATCGCCGGCAAGTAGGGGCCGCCTGTCTGTTGACAGAACTCACTCCTCTGTCCTATGAAGACCGC40.19065776930409914No Hit
GTATGTAGAAGGGCTGTTAAAAATGTAAAACTTGGTTGCATTATTTGTGGAGGCTCAAACTTGTGAAGGTT40.19065776930409914No Hit
GGTGTGAGCCGCTGCGTCCAGCCTAATTCAGTAGAAGATTTAAACAATTTGTGGAGAATTTTGAAGATAAT40.19065776930409914No Hit
GTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.19065776930409914No Hit
CTAAAATACAGACAGAGATAATAGAACAAGAAGATTTAATTAAGGCTCTGCATACACAGCTAGAAATGCAA40.19065776930409914No Hit
CTGCCATGCCCAGCCAGTCCCCACAGCATAACAGGGTCTCCTTGGCAGCTGTATTCTGGAGTCTGGATGTT40.19065776930409914No Hit
ATAGCGTTCTTGTAATTTTACACGCTTTTGTGATGGAGTGCTGTTTTGTTATATAATTTAGACTTGGATTC40.19065776930409914No Hit
GTGCCTAGAATACCGTCAGGCACATAGTGGGTGCTTGGGCAGTGTTTGTAGAATTAGGAAATAAATAAGTG30.14299332697807435No Hit
GCACTGACTAGGCCCTCTGCTGCCAGCTCCAAGCCCAGCCCTCAGCCATGGCATGCCCCCTGGATCAGGCC30.14299332697807435No Hit
ATACTTAATTTCTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14299332697807435No Hit
CCTGATTACGATGCTTTGGATGTTGCCAACAAAATTGGGATCATCTAAACTGAGTCCAGCTGCCTAATTCT30.14299332697807435No Hit
GTGCTCAGACTGGTAGCTTCAAACAGCTCACAGTTAAGGAAGCTGTGCTGAATGGTTTGGTGGCCACTGAG30.14299332697807435No Hit
CCTCAGGTGATCTGCCCGTCTCGGCCTCCCAAAGTGCTGGGATTACCGGCATGAGCCACTGCGCCTGGCCG30.14299332697807435No Hit
GGCTTAACTGGATGCCATAAGACAACCCTGGTTCCTTTGTGAACCCTTCTGTTCAAAGCTTTTGCATGCTT30.14299332697807435No Hit
CTATAATGGAGGATACCAACATTTCTTCCTAATATTCTATAATCTCCAACTCCTGAAAACCCCTCTCTCAA30.14299332697807435No Hit
GGGACAAGAAACAGAACTGTTTACTAACTTTGGGACATCCCCTGGAGTTTTTAAAAATAAATAAATATATA30.14299332697807435No Hit
GGCAGGAGAATCGCTTGAACCTGGTGGGTGGAGGTTATAGTGAGCTGAGATTGTGCCACTGCACTCCAGCC30.14299332697807435No Hit
AATTAAGGGTATAAAGAAGGGATGGTGAGGCCGGGCATGATGGCTCATGCCTGTAATCCCAGCACTTTGGG30.14299332697807435No Hit
GCCCCAGCTAAGGTTGAAGCCAAGGAAGAGTCGGAGGAGTCGGACGAGGATATGGGATTTGGTCTCTTTGA30.14299332697807435No Hit
GTTTATAAATCTTAAATGTTTGTATATTTTTCATTTGCAATAAAATGTTATTTAATTAAAAAAAAAAAAAA30.14299332697807435No Hit
GGAACATGAGCATGCTGCAGACCCAAGACCTCGTGAAGTCGGTCCAGGCCACGACTGAGAACAAGGAACTG30.14299332697807435No Hit
AAGCTAACTGTGTGTTTAGAAGGCACTGTAACTGGTAGCTAGTTCTTGATTCAATAGAAAAATGCAGCAAA30.14299332697807435No Hit
CCAAGATGGCGGCCGCAAACTGACACCTCAGGGACAAAGAGATCTGGACAGAATCGCCGGACAGGTGGCAG30.14299332697807435No Hit
GTGACTATTCTGTGGTTCTAGCTTTTGCAGGTGGCCCCAGCTCCTGGACTCCCACCTGCTCCCTTGGTCTC30.14299332697807435No Hit
CCTCCACTTCCCGCTGCAGCCAATAAAGGCCGTTCCTACCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14299332697807435No Hit
GCCCAAATGCAACAAAATTTCTTCTACAGAACCTATACAGATGTATCTTGCTTTATACAAAGTACATATTC30.14299332697807435No Hit
ATCTGTATGTTGGATGACTTTAATGCTACATTTTAAAAAAAGAAAATAAAGTAATAATATAACTCAAAAAA30.14299332697807435No Hit
GGATTTCATAATTGTCATTGTCACACTTTCAAATTTTTGTACATCAGTGACTTTTTTTTATATTAAAAGGT30.14299332697807435No Hit
GCAGAATAATCAAATACATTTTAAGCAAGTTAAGTGTCCTCCATCAATTCTGTATTCCAGACTTGGGAGGA30.14299332697807435No Hit
GTGTAAGATTTTCCCTAAAACTAGAATATATTAATGCATGTTTGAGAATTTTAAAGCACCATGGTCAAAAC30.14299332697807435No Hit
GAGCGGGTGAGCGGGGTGGGCACAGCCCCCTTCACTGCCCTCGACAGCTTTACCTCCCCCGGACCCTCTGA30.14299332697807435No Hit
GAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14299332697807435No Hit
GAATCGTAAGCTTATACAGGACCAGCAGGAACAGATTCAACATCTAAAAAGTACAACAAATGAGCTAAAAT30.14299332697807435No Hit
GACCTCCTGCTGGCTCTCGCCCACCAACCAAGTGTTACAAGCCCCAGAATGCTGCCCGGCCTGCCCTGCTG30.14299332697807435No Hit
CCTTTAATGACCCGTACTGAGACCACAGCTTCTTGGCCTCCCTTCCAGCTCTGCAGCTAATGAGGTCCTGC30.14299332697807435No Hit
GGTTCTTACTTAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14299332697807435No Hit
GAGTTCTCATTAAAAGAAATTTGCTTTCATTGTTTTATTTCTTAATTGCTATGCTTCAGAATCAATTTGTG30.14299332697807435No Hit
GGGCCTGTTTTGGAGGAGGAAAAGGGCTTGTACATAAATGTAAAACAGTAAAAGAAACATGGGAGGAAGAC30.14299332697807435No Hit
CCTTAGAACTTCTACAGAAGCCAAGCTCCCTGGAGCCCTGTTGGCAGCTCTAGCTTTGCAGTCGTGTAATT30.14299332697807435No Hit
GGGGCAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTAGCAGTGAGCTGAGATTGAACCATTGCACTCCAG30.14299332697807435No Hit
CCTCTACCACCACCCTGTACCCTAGCCTGCACCTGTCCTCATCTCTGCAAAGTTCAGCTTCCTTCCCCAGG30.14299332697807435No Hit
GGCTGGATGATTGGGACTTTAAAACGACCCTCTTTCAGGTGGATTCAGAGACCTGTCCTGTATATAACAGC30.14299332697807435No Hit
AAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14299332697807435No Hit
GCTTAAACAGGAAACCCTTCTTGTTCAGGACTGTCATAGCCACAGTTTGCAAAAAGTGCAGCTATTGATTA30.14299332697807435No Hit
GCTACTCAGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCTGAGATCAT30.14299332697807435No Hit
CTTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14299332697807435No Hit
GGGCTTCACCTAGAACTTCAGTGGGGGCCAAGGGTGCTGAGAACCCAGCAATGACCAGGAAGATACAGTCA30.14299332697807435No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)