FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002876658

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002876658
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3110
Sequences flagged as poor quality0
Sequence length71
%GC30

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA75024.115755627009648No Hit
GAGCACTTTGATATAATGCCTCATTCGGAACTTCACCTGGCAGAAGTTCACCGAGATCAGAGGCCCTGTGA521.6720257234726688No Hit
GGGTGAGTAAGTAGTTGGGTATAAGATCTGAGCTTTTCATCTGCAGAGGCAAGAAAAATATTTGACATTGT471.5112540192926045No Hit
GCATATGAACTGTACACAGAAGCCCTGGGGATAGACCCCAACAATATAAAAACAAATGCTAAACTCTACTG331.0610932475884245No Hit
GGCTGAAGCGCAAAAGAAGAAAGATGAGGCAGAGGTCCAAGTAAACCGCTAGCTTGTTGCACCGTGGAGGC310.9967845659163986No Hit
CACTAGGCATAAATGGTTTATTCAGTTGTGCAAATGAAAGCCATCTGACAGTTGGCTCACATTGAACACCT280.9003215434083601No Hit
GCTCCTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCCGAAAGTGC280.9003215434083601No Hit
CTTCTGAGCCCAGCGACTTCTGAAGGGCCCCTTGCAAAGTAATAGGGCTTCTGCCTAAGCCTCTCCCTCCA280.9003215434083601No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAG270.8681672025723474No Hit
GAGGAACAGCTCTTTGGACACTAGGAAAAAACCTTGTAGAGAGAGTAAAAAATTTAACACCCATAGTAGGC260.8360128617363344No Hit
GGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGATT260.8360128617363344No Hit
GCCCTTGGGCCACGCTCTTGAGGAAGCCCAGGCTCGGAGGACCCTGGAAAACAGACGGGTCTGAGACTGAA240.7717041800643086No Hit
GTGGCTGGAACTTAGAAATGGTTGCCTCTGCTGTTCAGTGAAGTGAGGAATGTGTTTACTGTGTACATGGT230.7395498392282959No Hit
AACTAAAGGACTTTGGATGCCACTGGGGAAAGAAGTCAAAGTTATGCAGTGTTGGCGTTGCAAACGCTATG220.707395498392283No Hit
CACAGTTAAGGAAGCTGTGCTGAATGGTTTGGTGGCCACTGAGGTGTTGATGTGGTTTTATGTCGGAGAGA220.707395498392283No Hit
GCTTAAACAGGAAACCCTTCTTGTTCAGGACTGTCATAGCCACAGTTTGCAAAAAGTGCAGCTATTGATTA220.707395498392283No Hit
CAGTAGGGAAATATTGGAAACAACCTAAATGTCCATTTATAAAATGAATAAATAAAATACAGTATATTTAA190.6109324758842444No Hit
AAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA180.5787781350482315No Hit
GGCTTATGTTTGGTGGCATTAAATTGGTTTCTTTAAAATGCTTTGGTGGCACTTTTGTAAACAGATTGCTT180.5787781350482315No Hit
GAAGCCTGGGTCTCCTCTAGCTTATTTGGTGTCTCCAGAGCTGTCCAGGAATTTGGTCTTGCCCGGTTCAA160.5144694533762058No Hit
CGCCTGAGCGTGGAGAGCACGAGTTAGTTGTAGTCCGGCTTGCGGTGGGGCTGACTTCCTGTTGGTTTGAG160.5144694533762058No Hit
GCAGCTGCTGATGTCTGGAGGCTGATTTTCCTGTTCTCTGTTCTCCACTGGAAAGGTTGTTTACGACAAAC160.5144694533762058No Hit
GCTTGGAGGCGAGCATTTTCACTGCTAGGACAAGCTCAGCTGTTGAGGACACCCCCACCCCAAATTTCAGT160.5144694533762058No Hit
GTTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCGCAGTCACACATTA150.482315112540193No Hit
GGCGGATCACGAGGTCAGGAAATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATA150.482315112540193No Hit
GCTGGGCTGCTGTGCAGAGTATAAGATTTTGGACTTGTTCATGTCCCCTCTCTCCCTATAAATGATGTATT150.482315112540193No Hit
GTAGTAGCGGTGGTCAGACATGGAAATGGTGGGGAGACAAAAATATACATGTGAAATAAAACTCAGTATTT150.482315112540193No Hit
CCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCCTCTGTGAGGCCAGCCCCCACCTTCCTCTTTC140.45016077170418006No Hit
ACACCATGAAGAAGAAATCGTTCATCATAAGAAGGAGATTGAGCGTCTGCAGAAAGAAATTGAGCGCCATA140.45016077170418006No Hit
CAGTTTACTGCACAGGTGCATCACTTCATGGAGTTATGTTGGGATAAATGTGTGGAGAAGCCAGGGAATCG140.45016077170418006No Hit
ACAGAGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTTAGATGTACCATAAAAA130.4180064308681672No Hit
CACCTGAAGTGCCAGCATTTGGACTTTTGCACCTTTTTTTCCCTTGGCCCGGCTGTCCCAACCAAGCTGCC130.4180064308681672No Hit
GTAACATGAAAACATTCTCCTCCGCATAAGCCTGCGTCAGATTAAAACACTGAACTGACAATTAACAGCCC130.4180064308681672No Hit
GGGCCTTCTATGCTGAGCTTTATCATATCATCAGCAGCAACCTGGAGAAAATTGTCAACCCAAAGGGTGAA120.3858520900321543No Hit
GCTTTCTCTCCAGCCTCTCTTAGGAGGGGTAATGGTGGAGTTGGCATCTTGTAACTCTCCTTTCTCCTTTC110.3536977491961415No Hit
CTTCTGAGCCCAGCGACTTCTGAAGGGCCCCTTGCAAAGTAATAGGGCTTCTGCCTAAGCCTCTCCCTCCC110.3536977491961415No Hit
GGATCCAGTGTATAAATCCAATATCATGTCTTGTGCATAATTCTTCCAAAGGATCTTATTTTGTGAACTAT110.3536977491961415No Hit
CCAATGGCACCTTGTTAAAAGCTGCTATGCCCCAAGAGAAGCATACTACAATCTTAGAAACTTCTCCTTTG100.3215434083601286No Hit
CCCCACCTCTGTGTGTGATGTAGCTTTCTCTCCCTCAGCCTGCAAGGGTCCGATTTGCCATCGAAAAAGAC100.3215434083601286No Hit
CCTTTTCCTACCCAAGGGGGAAGACTGGAGCCTAAGCTGCCTGCTACTGGGCTTTACATGGTGACAGACAT100.3215434083601286No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG100.3215434083601286No Hit
ATGAAGAAATTGTGGCACATGATGGCTCCGCTACTTACTTGAGATTCATTATTGTATCAGCCTTTGATCAT100.3215434083601286No Hit
GCATTTATTAGTATTCTAATAAAAGCATTTTGATCGGAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA100.3215434083601286No Hit
GGGCGTGGTGGCACATGCCTGTAATCGCAGCTACTCGGGAGGCTGAAGTAGGAGAATCACTTGTGCCCGGG90.28938906752411575No Hit
AAATAAATGTATTAATAAAGTTGCATAAAACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA90.28938906752411575No Hit
GATATAAGAGAAGAAGCAGAGAAATATGCTAAGGAATCTCTGAAGGAAGAAGATGAATCAGATGATGATAA90.28938906752411575No Hit
GACCACAATCCACTCCATTCATAAGAGCAAGTCCACTTTCCAGAGTCACACTCACACATTCTATTCTGGTC90.28938906752411575No Hit
GCCTTGTCTGAAGCTATGGGTCTCTTTTGTTTGATGGTTGCTTTCTTGATTTTGTTTGCCATGTAACAAAT90.28938906752411575No Hit
GCAACCATGTAATTATAAAGGAGCCCTACCTCTCAAGAGTGAAGTAAGGGTGAGAAAGACTATGTCATTTC80.2572347266881029No Hit
CTTCTAGTAAGCCTCTACCTGCACGACAACACATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA80.2572347266881029No Hit
CCCTCGGGCCCTCACGGAGGCGGGGGTTCCAGGGCACGAGTTCGAGGCCAGCCTGGTCCACATGGGTCGGA80.2572347266881029No Hit
CATCGAGAAGGACAAAATCACCACCAGGACACTGAAGGCCCGAATGGACTAACCCTGTTCCCAGAGCCCAC80.2572347266881029No Hit
TACCCTATTTTCAAAGGGTAATCGTAAGATGTTAACCCTTGGTATTTAGAAAATTAAAACCTTATAATATT80.2572347266881029No Hit
CCTCCGTCTCTGTGCAGCTCCGTCATTACCATAGGGGACTTGGTTTTAGACTCTGATGAGGAAGAAAATGG80.2572347266881029No Hit
GCTTTACTATAGCCGGACAATGGCGAAGTCGTCAGTAGACCAAAAGGATGGCTCAGCAAGTGAAGTACCCA80.2572347266881029No Hit
ATATCTGGCTGTCCTTTTTATAATGCAGAGTGAGAACTTTCCCTACCGTGTTTGATAAATGTTGTCCAGGT70.22508038585209003No Hit
AAATTAATGTAATAAAGTGAACTTTGTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA70.22508038585209003No Hit
GGGAAGAAATAAATCTTTGGCTCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA70.22508038585209003No Hit
GGGGCGGCCTGCCCTCATCTCATTTCTATTAAACGCCTTTGCCAGCTAAGAAAAAAAAAAAAAAAAAAAAA70.22508038585209003No Hit
TCTCCATACTGTTTCTTTCTTTTTTTTTCATTACTGTGTTCAATTATCTTTATCATAAACATTTTACATGC70.22508038585209003No Hit
GTCCAGGGCGCTGCGCCTGACGCCTTCGTCATACCCAAATTACGGCAGCTTGCTGCCTCCAGGCCCTTTCC70.22508038585209003No Hit
TTTTCCCATCATGGGCCCTGAAGAGGAGGGAGACTCTGCTGCTATAACTGAGGATGAGGCCGTGCTTGTGC70.22508038585209003No Hit
AGCCTTGGTGACAGAGCAAGACCCTGGCAAACACACACACACACACACACACACACACACACAAAACAAAC60.19292604501607716No Hit
GTGTTCGCTCTAAACAAAACAGTGGTAGGTTAATGTGTTCAGAAGTCGCTGTCCTTACTACTTTTGCGGAA60.19292604501607716No Hit
GCTCTGAGCTGCACTGGCCCCGGTGCTGGCATCTGGTGGAGCGGACCCACTCCCCTCACATTCCACAGGCC60.19292604501607716No Hit
CCTTTCATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA60.19292604501607716No Hit
GTTGTAAATAGTGTACGATACTAGCATCTGGTATTTTATTTATTTTGCAGCGAGCACATGAGGAAGCTGAG60.19292604501607716No Hit
ACAATATATTCTCGGTCCAAGTGAGTAAGTTCTTTGCTTTATGTGAATCCAATAAAAAATCCAAAGAATTT60.19292604501607716No Hit
ATTAAAAAGCGTCACCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA60.19292604501607716No Hit
CCCTCACTGCTGGGGAGTCCCTGCCACACTCAGTCCCCCACCACACTGAATCTCCCCTCCTCACAGTTGCC60.19292604501607716No Hit
GTTTTGTTATATAATTTAGACTTGGATTCTTTCCATTTGCATTTGTTTATGTAATTTCAGGAGGAATACTG60.19292604501607716No Hit
CAATGTATCAGAAGCTTTGAGATCAGCAGGGCTACCATCTCACTCTTCTGTAATTTCACAACATTCTAAAG60.19292604501607716No Hit
GACTTGATAAGAGGCGCAAAAGAAAAGAATCTCAAAGTGAAAGGACCAGTTCGAATGCCTACCAAGACTTT60.19292604501607716No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCCAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAG50.1607717041800643No Hit
GCCCTGGGGGCAGCTCAGGCTACTGCTAAGGCCTGAGAGTTTTTGCAGAAATGGGGCAGAGGGACACCCTT50.1607717041800643No Hit
GAAGACAGAATTCAAAGCAAATGCTGAGAAGACTTCTGGCAGCAACGTAAAAATTGTGAAAGTAAAGAAGG50.1607717041800643No Hit
GAATGAATTATATTTTCAGAAGTAAAGCAAAGAAGCTATAACATGTTATGTACAGTACACTCTGAAAAGAA50.1607717041800643No Hit
TGTTTATACTGTATGATAATTAAAACATCATGTAAAGATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.1607717041800643No Hit
GGACCACTGAAGAAAGACCGAATTGCAAAGGAAGAAGGAGCTTAATGCCAGGAACAGATTTTGCAGTTGGT50.1607717041800643No Hit
GCCTATAATCCCAGCACTTTGGGAGGACAAGGCAGGAGGATCACTTGAGCCCAGGAGTTTGAGACCAGCCT50.1607717041800643No Hit
GAGATGGTCTGAGTTTGTCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.1607717041800643No Hit
ATGTTAAGTAACACACTTATTTTTGCCTGTGTATGGAGAGATTCAAGAAATAATTTTAAAACCGCATACAT50.1607717041800643No Hit
CAGAAATGAAACTGTCCTTTTGACAACTCTCTTATATAATAAAGTATCACCGGCTTGTGTATGAAAAAAAA50.1607717041800643No Hit
ATGTACCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.1607717041800643No Hit
TGTTTTGGTTATTCATGATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGC50.1607717041800643No Hit
ACTTGTCAAGGAATGTTATCAGTATTAAGCTAATGGTCCTGTTATGTCATTGTGTTTGTGTGCTGTTGTTT50.1607717041800643No Hit
CCTTAGGCGATTCACCCACCTCAGTCTCCCAAAGTGCTGGGATTACAGTTGTGAGCCACTGCGCCCAGTTC50.1607717041800643No Hit
CTTCAATACAAAGTGTTAATATGTGTCATCAGTATAATAACAACCAACAAAATGCCACTTTCAGAAAACTG50.1607717041800643No Hit
GAGGTCATTTGATCTTTTGGTAAAGAATCTAAATGGGAAGAGTTACTCCATGATTGTGAACAATCTCTTGA50.1607717041800643No Hit
AAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.12861736334405144No Hit
AGCCTTGGTGACAGAGCAAGACCCTGGCAAACACACACACACACACACACACACACACACACAAAACACAC40.12861736334405144No Hit
ATTCCATCCTGCCCAACCCTTCCTCTCCCATCCTCAAAAAAGGGCCATTTTATGATGCATTGCACACCCTC40.12861736334405144No Hit
GACCTCGTCCATCTGCACCAGGCTCTGCCTTCACTCCCCCAAGTCTTTGGAAATTTGTTCTTTTCCTTTGA40.12861736334405144No Hit
GCCTTGTCCAACAGGAAGATATCACAAACCTAAACATATATGCACCTAATGCTGGAGCTCCCATATTTATA40.12861736334405144No Hit
GATTTATTGCACTTGCAACAGAGTTTAAATAAGTCCTGGGTGTCTGGTGCAAGTGCAATAAATCTGACCCA40.12861736334405144No Hit
ACAGGAGGAAATAGGACCAAGACCCCTGGACCTGGGGCCCAGTCGGCCCTCAGAGCCCTTGCCCGCTCGGG40.12861736334405144No Hit
GTATTAAACTTTGTTTAGATGTACCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.12861736334405144No Hit
CTGGAAGAGATTACCAAGAGAATAAAAAGAGACTCATTCAGTGGAAAAAAAAAAAAAAAAAAAAAAAAAAA40.12861736334405144No Hit
CCCCTAGTGTGCCCAAGTCAGCCTCATATTCTGGGCGGACAGCTTGTCTGGACTTCGGAGTTGGGGGTGGT40.12861736334405144No Hit
ATTTGGGCCTTTTGTATTGCACTCTTGATATTAAATTAAATGTGCCTTGAAAAAAAAAAAAAAAAAAAAAA40.12861736334405144No Hit
GCATTACTCTGCACTATAGCCATTTGCCCCAACTTAAGTTTAGAAATTACAAGTTTCAGTAATAGCTGAAC40.12861736334405144No Hit
GAATAAAATTTACCCATTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.12861736334405144No Hit
GCAGAGGAGAAGAAAGATGAGAAGAAGGAGGAGTCTGAAGAGTCAGATGATGACATGGGATTTGGCCTTTT40.12861736334405144No Hit
TGAGGATACAGCAAGAGGGCAGCCAACTACATTCCTGGAAGACAGCCCTGAAACCAACACTGATGGCACCT40.12861736334405144No Hit
AGCCAGAAGCATCCCATGGACCATGGGGTGAGTGTCCTCCAAGAGCCCCCTGAGCTCAGCCCTCTGCCTGG40.12861736334405144No Hit
ATCCTAACCCTTGAATGACTCAAATCAGTGCCAGGTGGAGGACTCCCATCACCTTCTCTCAGAACAAAATC40.12861736334405144No Hit
GACCTGATTATACAGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.12861736334405144No Hit

[OK]Adapter Content

Adapter graph