FastQCFastQC Report
Thu 9 May 2024
EGAF00002876727

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002876727
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4225231
Total Bases299.9 Mbp
Sequences flagged as poor quality0
Sequence length71
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG331630.7848801639484325No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA116020.2745885372894405No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)