FastQCFastQC Report
Wed 8 May 2024
EGAF00002876778

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002876778
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences116661
Total Bases7.6 Mbp
Sequences flagged as poor quality0
Sequence length66
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA42963.6824645768508755No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG7340.6291734169945398No Hit
GTAATAGGGCTTCTGCCTAAGCCTCTCCCTCCAGCCAATAGGCAGCTTTC1830.15686476200272587No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)