FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002876789

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002876789
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11497
Sequences flagged as poor quality0
Sequence length66
%GC35

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA120910.515786726972253No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG410.35661476907019224No Hit
GTTATTATGTTAGTAGATCAAAGGAGAAAAAACTATCTGGTTAGTTGTCAAGACACTGATAAGAGT160.1391667391493433No Hit
CCTATATACTTTTCCAAAAAGAGGTGGAGAGAATATTTATTGACTTAGGTATGTCTGTGATGATCT150.13046881795250936No Hit
GATTTAGAGATTATTATTTTTCAGTGTGCACCTACTGTTTGTATTTGCAAACTGAGCTTGTTGGAG150.13046881795250936No Hit
GTATATGTATTTTTTTAAGTGACCTCCTCTCCTTCCACAGACCCCACATGCCCAAAGGCCTCGGGA150.13046881795250936No Hit
CTTTAAGGATGGTTTAGAAATGGAAAAATGTTAACAAATGTGGCAATTATTTTGGATCTATCACCT140.1217708967556754No Hit
ATATATGATTTTCTTTAAGGATGGTTTAGAAATGGAAAAATGTTAACAAATGTGGCAATTATTTTG130.11307297555884144No Hit
GATAAAACTTAAGGGCTTAGAAGAGACCAGGGACCTGGAAGAGAAGTTGAAAAGGCACTTAGAAGA120.10437505436200747No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)