FastQCFastQC Report
Wed 8 May 2024
EGAF00002876795

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002876795
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences432124
Total Bases30.6 Mbp
Sequences flagged as poor quality0
Sequence length71
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG29040.6720293249159963No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA28470.6588386666790088No Hit
GATTAATACAACTACTTAAAAAATATAGTCAATAGGTTACTAAGATATTG6310.14602290083401986No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)