FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002877163

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002877163
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39325
Sequences flagged as poor quality0
Sequence length71
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4211.0705657978385252No Hit
ATCTAATATCTATGTATTTATTTCGCTGGTTCTTTGTAGTCACATATTTTATAGTCTTAATATCTTGTTTT780.19834710743801653No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG590.15003178639542275No Hit
GTATAGGAAGAGTACCCACATCAAGACTGGGGACAGGAGGCAGTCATGGAAAGCTTCCTAGAGGAAGGAAC550.13986013986013987No Hit
TTATTACTGCTGTTAGCAGTCGTTTTCACCAGGTACTTACAGAGCAGATTTCATACATCATTCATTCAAGG420.10680228862047043No Hit
CCTCTACCCCCTCTAGAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA400.101716465352829No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)