FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002877324

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002877324
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32830
Sequences flagged as poor quality0
Sequence length71
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA6091.8550106609808104No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2530.7706366128540969No Hit
GATTAATACAACTACTTAAAAAATATAGTCAATAGGTTACTAAGATATTGCTTAGCGTTAAGTTTTTAACG660.20103563813585135No Hit
ATTTAAAGCCTAGTTAACGCATTTACTAAACGCAGACGAAAATGGAAAGATTAATTGGGAGTGGTAGGATG540.16448370392933293No Hit
CTAAGATATTGCTTAGCGTTAAGTTTTTAACGTAATTTTAATAGCTTAAGATTTTAAGAGAAAATATGAAG450.13706975327444412No Hit
GTCTAGAGCTTGTCTCAATGGATCTAGAACTTCATCGCCCTCTGATCGCCGATCACCTCTGAGACCCACCT420.1279317697228145No Hit
CTGTCCCCGCTGCTGGAGCTGCGCGCTAACGGGCTGCTGCCAACCTAAGTGCAGCGCCCCGCGCCTGGCTC410.12488577520560462No Hit
TCCTAGATGAGGAAGTGAAGCTTATCAAGAAGATGGGTGACCACCTGACCAACCTCCACAGGCTGGGTGGC380.11574779165397502No Hit
GAAATTTAGGTGTAAATCAATACGTTCTACAGGGAAATAATGAGGCTAAGTATTTTTATGTTTTTAGTGGT380.11574779165397502No Hit
GACAGAAGGATGTAAAGGATGGAAAATACAGCCAGGTCCTAGCCAATGGTCTGGACAACAAGCTCCGTGAA370.11270179713676516No Hit
ATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCT360.10965580261955528No Hit
ATAGAGGGCTGCGTCACTTCTGGGGCCTTCGTGTCCGAGGCCAGCACACCAAGACCACTGGCCGCCGTGGC350.10660980810234541No Hit
GTAAGAGGTATCTCCATCAAGCTGCAGGAGGAGGAGAGAGAAAGGAGAGACAATTATGTTCCTGAGGTCTC330.10051781906792567No Hit
TAAATGCAGTCTTACTGGTTTGACAGCAATTTCATATATAATTATTGAGGACTACACACCAATTGAAGAAA330.10051781906792567No Hit
GTGCAGTATATTTTTCTAAGTTTTGGAAAGCAGGTTTTTTCCTTTAAAAAAATTATAGACACGGTTCACTA330.10051781906792567No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)