FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002877662

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002877662
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7969
Sequences flagged as poor quality0
Sequence length71
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1762.2085581628811646No Hit
GTATACATGGTGGTCAAGAGCTCGGAATTTTTGAGTCCTTGCACCTTGGACTGGGTCAGAATCCTAGCTGC240.3011670222110679No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG190.2384238925837621No Hit
AAATATATTTCATCCGAGATTTGGCTAGAGTATTTATTTTTAAGATTGGTAGAGATTGACTTTGGAAAGGT180.2258752666583009No Hit
ATCTATATCATTATATAAATAGTCAAACCAATGTATAAGTTTGAGGTGTGCAGTGAATAAGGACCAACTCT160.2007780148073786No Hit
GATGGTGATGGAACTATAACAACAAAGGAATTGGGAACTGTAATGAGATCTCTTGGGCAGAATCCCACAGA140.17568076295645627No Hit
GTATTGAATCAGGGAGGTTAAGGCTGTGGTGAGTTGTGATCACACCACTGCACTCCAGCCTGGGTGACAGA140.17568076295645627No Hit
GTACAGGGTCTGGGATAGAAGAGGAGCCTAGCAAATGTTTATTTGCCTGGTCTCCATCCTTACAGAAATGA140.17568076295645627No Hit
GGAAGGGAATTCCCACAGCCCTCCAGTGTACTGAGGGTACTGGCCTAGCCATGTGGAATTCCCTACCCTGA120.15058351110553395No Hit
GTCTGAGAGTGTAACTTCATTACTTGAACATTTACCATCTGATCTTGTGGATCAAAGTATATTTAATTTTA120.15058351110553395No Hit
CCCTATAGAAGAACTAATGTTAGTATAAGTAACATGAAAACATTCTCCTCCGCATAAGCCTGCGTCAGATT120.15058351110553395No Hit
ACTTTTTATGATTGCCACTTATGCTTTCTTGCCAGATGCCTTTGGAGCAGGTGCTTTCTGGCAAGAAAGCA120.15058351110553395No Hit
ACACACCTATTAGCATAACTAACATTTATTAAAAACAACAATACAGTGCTGACAAGGGTGTAGAATACCTG120.15058351110553395No Hit
CTTCATTAGCCATTCTCAAGAAGAAACGCAAGAAATGTTAGAAGAAGCAAAGAAAAATTTGCAAGAAGAAA110.13803488518007279No Hit
GAATTCCCTATTTATTTGACAAAAAATCCAGTTAATATATTAATGTGAAATAAACCCTGTTTGCACCTCGA110.13803488518007279No Hit
CCCTACACGACGCGGTGGACTACTTTGGACAGAAGTAGGTTTTTGAATGTAACAAGATAAGTCAACTTGAG110.13803488518007279No Hit
CCCGTGAAGCGTGTTTTTGCTCCTGAGGTGCATTTTCTCATCATCCTTGCTTTACCACAATGAGCAATGAG110.13803488518007279No Hit
AAATGGGACTGATGTCATCTTGAGCTCTTCATTTATTTTGACTGTGATTTATTTGGAGTGGAGGCATTGTT110.13803488518007279No Hit
CTACTGTGGATACTACAAGACTGAAAAGAAAATCGTATGTTGTCATTCTCTGGCTATGGAGTGTTTGTGGC110.13803488518007279No Hit
TGAAAGTATGGAATATTTCAAGTTACATTTGTAAATATCAGAGAAAGTATACATGGTGGTCAAGAGCTCGG110.13803488518007279No Hit
CCTCTATCCAGATATTGCCATACCAATATTTAGGCTGTATCACTGCCAACTCCAAGAGTTGGTATTATCAC100.12548625925461163No Hit
CTTCATAGCTGTTTGGGTTGCTCATTCTACATCACGACAATCTCATCATATTATTTCTATAACTTTTCAAG100.12548625925461163No Hit
ACATGGTGAAACCCCATCTCTACTACAAATACAAAAATTAGCTAGGCATGGTGGCAGCCACCTGTAATCCC100.12548625925461163No Hit
GTACATTACCATATAATGTAAAAAGATCTACATACAAACAATGCAACCAACTATCCAAGTGTTATACCAAC100.12548625925461163No Hit
AGTGAGACCCCCATCTCTACAAAACATTTTTAAAATTAGCCAGGCATGATGGTACATGCCTGTAGTCCCAG100.12548625925461163No Hit
GATCAAAACCTATGCATGTTTTCAAAGCTTTGATCTGCAGTTACACATGCATAAATTGTTCTGCAAAAAGT100.12548625925461163No Hit
GAGTTACTGATGTTAATAGGGTAATAAAATTTTAAAAGCTTCAGTCTGTACTATCTTTGTGGTTCTGAATA100.12548625925461163No Hit
CCATAACAAAGTCTTGCCCTGTATTAAATGCAATTTTCTTAAAAACAAGCAAACCTTTTGGACATCATTTT100.12548625925461163No Hit
CTATATGTGATGTAAAAGTTATTACACTAAACAGGATAAACTTTTGACTCCCCTTTTGTTCATTTGTGGAT100.12548625925461163No Hit
ATTTTGTTCTTTGTGTCTTAATCATAAAGGAACCAGCCTAGGTCTCATAAAACCACAAAGGGCCTCTTGAT100.12548625925461163No Hit
GAACTCAGTGGAGCGAGCTGTAGTGTGAAAGGAGATGTCAGTTCATGCTTTTCTGAAAAGAATGGGTCCGG100.12548625925461163No Hit
CCTCCGGGGTGGCGCTGGGGTTGGCTCCATGACCAAGATCTATGGGGGACGTCAGAGAAACGGCGTCATGC100.12548625925461163No Hit
AAGAATCCCTGATGTCTTATTGGAACAACCACTGAGCTACGGAGAGCTCTGCTGTGATGGGCTAGGCACTT100.12548625925461163No Hit
CAGCAAGCGTAGTCGAGGAGCCCTGGGGTCCATCGCCCTCCTGGGCTTGGTGGGCACAACTGTGTGCTCTG100.12548625925461163No Hit
CCAGAAAACTACGATAGCCCTTATGAAACTTAAGGGTCGAAGGTGGATTTAGCAGTAAACTGAGAGTAGAG90.11293763332915045No Hit
GTCTTGAACTCCTGACCTTGTGATCCACCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCC90.11293763332915045No Hit
TGATTAGAAAAATAAACCATTGTTTCTTCAATTGTGACTGTTAATTTTAAAGCAACTTATGTGTTCGATCA90.11293763332915045No Hit
CATATATCCTCGACCAGATGCAGTGCTATAAGAACAGAACGCATTTTGGATGTTATTATTAAGAACCAAAT90.11293763332915045No Hit
ACCAGAAGAAGTGTGAGAAGACTGGCTAGTGTGGAAGCATAGTGAACACACTGATTAGGTTATGGTTTAAT90.11293763332915045No Hit
AAGTAACTCGGGCCCATGGAAACAGTGGCATGGTTCGTGCCAAATTCCGAAGCAATCTTCCTGCTAAGGCC90.11293763332915045No Hit
TTTCAATTCCAATTCTTGTATTAAGTTTTTTCCTTTCAGTTTTAGGTGCGAAAGTAATCAGTCAATCCAAT90.11293763332915045No Hit
CCCTAACATCACAATGAAAAGAACTAGAGAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAA90.11293763332915045No Hit
GGACTCTGGACTTCGCAGGTTCCTGCCTGTCACGCCACCCCCTTCCTGGGAGCAGCGAGCAGTGCCCCAGG90.11293763332915045No Hit
ATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCT90.11293763332915045No Hit
GCCTTCCTCCAGCTGCAGAGCCTTCTCCTGTAAGTAAAGAACAGTCCAAAATTGGCAAAAAGGAGCCTGGT90.11293763332915045No Hit
TGTTATTAGTGTCCTTTTTTATTTCTAATGCCTTGTCCTCTTAAAAGTTATTTTATTTGTTATTATTATTT90.11293763332915045No Hit
GGTTAGAAGACTGCAGCTTGGAGTCTCTCTAGGTTTTCAACTATTTCTTCACAATTTGAACACTTGACGGT90.11293763332915045No Hit
GGCTTATGTGTGAGAGACTTTTTTTGGGTTTTTTTTGTTCTGTTTTTTTGAAAAGCCAGTACCAAAAGCTT90.11293763332915045No Hit
CTACTAGGTATCCTGCTAGGGTTTTCAATTCCAATTCTTGTATTAAGTTTTTTCCTTTCAGTTTTAGGTGC90.11293763332915045No Hit
CATTTGAATAGAATATTTGTGTAATATTTAGTCTAGTGTTAGTCCTTAAATCTGCCAACAAAACCAGATAG90.11293763332915045No Hit
TCCCTACACGACGCGGGGGAGCCATTGTGGCTCCGGCCGGTTGCGCGGGCCCTCGGACCCTCAGGGTAGGC80.1003890074036893No Hit
ATAATAGACAGGCCCCACCTCTCAAAATATTTTTAGAAGTCTTTTTGTAAACTAATTTCTTTTGATCACTA80.1003890074036893No Hit
GTGTATCTACTTAGTATTGCAATGTAAGTTACTCAATTCACCAATGTATTTCAACAATTAAAACATTTTTA80.1003890074036893No Hit
CCCCAGAAATCACTGTGAAATTTCATGATTGGCTTAAAGTGAAGGAAATAAAGGTAAAATCACTTCAGATC80.1003890074036893No Hit
GAAGAAAGTCAGGGGGACTGCAAAGGCCAATGTTGGTGCTGGCAAAAAGCCGAAGGAGTAAAGGTGCTGCA80.1003890074036893No Hit
GTATTGCAATGTAAGTTACTCAATTCACCAATGTATTTCAACAATTAAAACATTTTTATCCCTCTTCACTC80.1003890074036893No Hit
ACATTATTCCTAATAATAGGGATAATGCTGTTTATTGTCAAGAAAAAGTAAAATCGTTCTCTTCAATTAAT80.1003890074036893No Hit
GGTAAACTGTGAGATGAGAAATGGTTTTCAGAGTATTAGATGGAATTCACCCCCGTTGAAGTTTATAAATG80.1003890074036893No Hit
TCTCCCTGACTTGGTGCTCACATGCACCTCACTAGGGTTTGTGACCAGGGTCTGGATGAGCTTGAATTTGA80.1003890074036893No Hit
TCCCTATTCCTTAACTATGTATTTTTATTTCAGTGAGAGAAGGAAAGTTGTAAACTAGCCCATAGTCACCT80.1003890074036893No Hit
GCAGAATATGCTAAACTTTTGGCCAAGAGAATGAAGGAGGCTAAGGAGAAGCGCCAGGAACAAATTGCGAA80.1003890074036893No Hit
GTGATACCCAAGATGAAGTCAAACTTCCTTTGAAGCTCAAAGGGAGAAAGGGAATGAAATCCCTATCTTGG80.1003890074036893No Hit
CATTTTATCTGAGGTGGAAATGAAAATTCTAAAGAGAAAATATTTTAAAAGATATTGTATTTATGTTGCTT80.1003890074036893No Hit
GGAATAAGGAATGTGCCATACCGAATCCGTGTGCGGCTGTCCAGAAAACGTAATGAGGATGAAGATTCACC80.1003890074036893No Hit
GCTATTTATATTAGGTACAGCTATTAAAACAAGGTAGGAATGAGGCTAGACCTTTAACTTCCCTAAGGCAT80.1003890074036893No Hit
GAGACTATCTGCACTACATCCGCAAGTACAACCGCTTCGAGAAGCGCCACAAGAACATGTCTGTACACCTG80.1003890074036893No Hit
GCGCTACTATGAAACACACAACGTGAAAAATAGGAACAGGAACAAAAAGAAGACCAATGACTCAGAGGGAC80.1003890074036893No Hit
ATTTTAATTGTATAGAAAGAAAAAAATGCCTAAAATAAGGTTTTCTTGCATAAATACTGGAAATTGCACAT80.1003890074036893No Hit
CACAAATGCCTTGAGACAGCTACAAGGATTTCCATTTTATGGTAAACCAATGCGAATACAGTATGCAAAAA80.1003890074036893No Hit
GTCTAGTGTTAGTCCTTAAATCTGCCAACAAAACCAGATAGATGTCTTAAAGTAGGCACATTTATTCCATT80.1003890074036893No Hit
CAAGTTGGGACTGTTTCCCTCAAATTTTGTGAAAGAATTAGAGGTAACAGATGATGGTGAAACTCATGAAG80.1003890074036893No Hit
TCCCCACTGATAGGAAGGTCCTAGGCTGCCGTGGCCCCTGGGGATGTGTGCTTCATTGTGCCCTTTTTCTT80.1003890074036893No Hit
TTGTCAGCACCGTACAACTAAAGTTAAGGAGGCACTGTTAATTAAAACTTGCACAGTTTCTGAATTAGAAG80.1003890074036893No Hit
ATCCTGGCCTGTCCATTGGTGATATTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGATGAC80.1003890074036893No Hit
CAGTTTCCTTAAAAATTATAACATTTTCCCACCTTTATTTTATTATTACCACGAATAACTGGTTGGTTGGA80.1003890074036893No Hit
ATTATTTGATCTAGAAATTGCCCTCCTTTTACCCCTACCATGAGCCCTACAAACAACTAACCTGCCACTAA80.1003890074036893No Hit
ACTAAATCCAGCATATGATAATGGAAGGACAACTCTTGACTTAGTTTGGATGTAAATGAAAAAGCACAAAA80.1003890074036893No Hit
TATTTATGCTGTCTGAAGGTCACGATCATGTTACCATATCAAGCTGAAAATGTCACCACTATCTGGAGATT80.1003890074036893No Hit
ATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAATCTTTTTTAGCA80.1003890074036893No Hit
GATCTATGGGGGACGTCAGAGAAACGGCGTCATGCCCAGCCACTTCAGCCGAGGCTCCAAGAGTGTGGCCC80.1003890074036893No Hit
GACACATGTTATGCGGTTCTTCCATGAAACAGAAGCGCCAAGGCCAAAGGATTTCCTATCCAAGTTCTATG80.1003890074036893No Hit
AATTGGTACAGGCGAGTCCTATAGTCCAAGATGGCGCCACACCACCAAAGCCTTGAGGCCACACCACTCCC80.1003890074036893No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)