FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002877711

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002877711
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2285
Sequences flagged as poor quality0
Sequence length71
%GC30

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA62627.39606126914661No Hit
AGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTC451.9693654266958425No Hit
GCCTCACACACTCCACATCTTCCATCTGAATTGCCTCCTAGATATGAAGAAAAAGAAAATGCTGCAGCTAC341.487964989059081No Hit
GGGCCTTCGGAAAGAGAGAGCAGGCTGAAGAGGAACGATATTTCCGAGCACAGAGTAGAGAACAACTGGCA331.4442013129102844No Hit
GGAGCCGGGACCTTCCCTGTGAGGACAGGGCCCTTCCTTGTGGGGACCAGGGGACCAGAACCTTCCTGTAG311.3566739606126914No Hit
TCTTACCACAAGGCACACCTACACCCCTTATCCCCATACTAGTTATTATCGAAACCATCAGCCTACTCATT291.2691466083150984No Hit
GGCAGGCGGATTGCCTGGGCTTAGGAGTTCAGGACCAGCCTGGGCAACGTGGCAAAACTCTGTCTCTACTA271.1816192560175056No Hit
AGGAGGAAAGGCCAGACTCACAGAAGGGTGTTCATTTAGAAGAAAGCAACACTAATGATTCAAACAGCTTC271.1816192560175056No Hit
GTTTATCTGACAAGGTCCTACCATACACACTGATAGGCACTTGATTTTATGGCTTCCTAATATCTCTTGCA231.0065645514223196No Hit
CAGCTGAGGGAGGAAAGAGCAGTTAACAAACAAAGGCAGTAGCTCATCACTTGGGTAGCAGGTACCCATTT231.0065645514223196No Hit
GGTGTGAAGACATGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGCGAGGAAGATTGCTTGAGCCAGAGA220.9628008752735231No Hit
GAGCTTTGTGTAAATACTTGCTGAGCTGTCAATATGTACCCAGGAGGTTTCTGTAGTAAGATGTAAACTGT210.9190371991247264No Hit
GCTTTTCAAACAAAGATGCCACATTCAAAATAGGGTATATTTTCCTATATTACGGTTTGCCCCTTTATAAA170.7439824945295405No Hit
GCAAGAGTTAGGGGCCTTAGGGCACTGGGCTGTTGTTCCATTGAAGCCGACTCTGGCCCTGGCCCTTACTT170.7439824945295405No Hit
CTGGAGAACGTTCTAAGTGGTAAAGCCTGAAGCCTCCACTGAGGATTAAGAGCAACAGCCCCAGAGCCTGG170.7439824945295405No Hit
GTGCCTTAAGAAACAAAGCCCTGTCCTAATTTATCTAGCTTGTCAGTCCGGTCTTAGAGATACCCTCTTTC170.7439824945295405No Hit
GCTCATGATGGCTGGTATCGATGACTGCTACACCTCAGCCCGGGGCTGCACTGCCACCCTGGGCAACTTCG160.700218818380744No Hit
CACTTATTTTTGCCTGTGTATGGAGAGATTCAAGAAATAATTTTAAAACCGCATACATAATAAAAGACATT160.700218818380744No Hit
GGTCATTGAGCATATCCAAGTGAACAAAGCACCTAAGATGCGCCGCCGGACCTACAGAGCTCATGGTCGGA150.6564551422319475No Hit
CAATAAATCAAAACTGTCTCTCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA150.6564551422319475No Hit
GTCTTTTGAAAGCACTGTTACAGTTGTATAAAGATGATGTAAAAATAAAAAAAAAAAAAAAAAAAAAAAAA140.612691466083151No Hit
GGCTTTGTAAATTTAAATATGTAAGTGCTATATAAGTCAGGAGCAGCTGTCTTTTTAAAATGTCTCGGCTA140.612691466083151No Hit
GTATATTTGTGATGCAATGGTCTTGTAAAGGTTTTTAATGAAAACTACCATTAGCCAGTCTTTCTTACTGA140.612691466083151No Hit
GTCCCGAACCCCTGGTAATAGAATTGTTTACCTTTATACCAAGAAGGTTGGGAAAGCACCAAAATCTGCAT140.612691466083151No Hit
GGACGGGCTGGTCTGGGGGGCTTCCAAGCTGGTGCCCGTGGGCTACGGTATCCGGAAGCTACAGATTCAGT130.5689277899343544No Hit
CACCGTGAGGCCAAGATCCCCTCAGAAGGCAGGAGTGCTGCCCTCTCCCATGGTGCCCGTGCCTCTGTGCT120.5251641137855579No Hit
CTAAATATTCAGAATCTTTGTTAAGGTCCTGAAAGTAACTCATAATCTATAAACAATGAAATATTGCTGTA120.5251641137855579No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA120.5251641137855579No Hit
GCTTCACATGGTTGTCCATTCTGGGGCTTAAAGAACTGGGACCAGACCAAGTAGAGGCCTTGGTGCTGGTT120.5251641137855579No Hit
GTTTTTGAATAATTGAATGCTGTGAATACTAATCAATAGAATCATAGGACCCACGTCATGACATAGAAACA120.5251641137855579No Hit
CGCAAACTGACACCTCAGGGACAAAGAGATCTGGACAGAATCGCCGGACAGGTGGCAGCTGCCAACAAGAA110.48140043763676155No Hit
CTCTTCCGCTGGCGGCATCAGGCCCGGGTGGAACGCATGGAGCAGTTCCAGAAGGAGAAGGAGGAACTGGA110.48140043763676155No Hit
GGCTGTGGGCACATGGGGCCCCGCAGGTTCCTTGGAGGAGCCCTGAGCTGGGAGGCAGCAAAGGCTGACCT100.437636761487965No Hit
CTTTCACTGAGGATGCTGTCCTCTGATTTAGCTGCTGCCTCCAGCCTCTGGCTTGAGAACTTACTAAAGGC100.437636761487965No Hit
GCGAGTATCTCTTCGAAAGGCTCACTCTCAAGCACGACTAAGAGCCTTCTGAGCCCAGCGACTTCTGAAGG100.437636761487965No Hit
GTATAATAGAGATAAGTCCATTTTTTAAAAATGTTTTCCCCAAACCATAAAACCCTATACAAGTTGTTCTA100.437636761487965No Hit
GACAAAGACCGCAAAAAGATCCTCGAACGGAAAGCCAAATCTCGCCAAGTAGGAAAGGAAAAGGGCAAATA100.437636761487965No Hit
GCCTGGGTCAGATTTTTATTGTGGGGTGGGATGAGTAGGACAACATATTTCAGTAATAAAATACAGAATAA100.437636761487965No Hit
GTTTTCGTACCTTCCCACTGGCCTCAAGTGAGCCAAGAAACACTGCCTGCCCTCTGTCTGTCTTCTCCTAA100.437636761487965No Hit
GCCTTTGTGCAACTGTGATGCAGCAGTTATCTCAGAATTGTTAATGTGAATATATCTGGATGGGGGGTTTT100.437636761487965No Hit
TCACGGAACAAGGGCCCCGGGAAGCTGAGGACCTGGACTGCCTGGCAGCAGAGGTGGCGGCCTGAGGGGTC90.39387308533916854No Hit
GTGCAGACTCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA90.39387308533916854No Hit
GTGGCGGCCTGAGGGGTCCCGGGAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAA90.39387308533916854No Hit
CCCATCCCCTGAGCACACTAACCACCTCATGCAGGCCCCACCTGCCAATAGTAATAAAGCAATGTCACTTT90.39387308533916854No Hit
GGATCATGCCTTAAAAAGAAAACTTTTGTTAAAGTATTCCACTGAAATCACAGATATTTGTGGGTATTATA80.350109409190372No Hit
GAAAAGATATTATTCCCATCATGATTTCTTGTGAATATTTGTTATATGTCTTCTGTAACCTTTCCTCTCCC80.350109409190372No Hit
CCTTCCTGTTTTTATCTAATAAAATGCTAACCTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA80.350109409190372No Hit
GCATTAAAGTGATTCACCCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA80.350109409190372No Hit
CCTCTGGCCGCCGCGCGGGAGAGAGGCCGAGATGGCAGATGAGATTGCCAAGGCTCAGGTCGCTCGGCCTG80.350109409190372No Hit
GTAAAGGAACTATGTGGGATGCATTTGGTGATCTTTTTAAAAAATGTATAAATTTCTTGAGTAATTCCTGG70.3063457330415755No Hit
CCCTGGGTCAGTGTGGTCGACAGAGTGGCTGAGCAGGACACACAGGCCTGAGCAAAGGGCCTGCCCAGACA70.3063457330415755No Hit
CCGCCGGGTCCTCCAAGCCCTGGAGGGGCTGAAAATGGTGGAAAAGGACCAAGATGGCGGCCGCAAACTGA70.3063457330415755No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60.26258205689277897No Hit
CTACAGATGCCAGGGAAATGTCCAAAACATTCATCATTGGGGAGCTCCATCCAGATGACAGACCAAAGTTA60.26258205689277897No Hit
CATTTAATGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA60.26258205689277897No Hit
CCACCTTCTGTGCTTTTTGCTTGGGATAATGGAGTTTTTCTTTAGAAACAGTGCCAAGAATGACAAGATAC60.26258205689277897No Hit
GATTAACATTTGTGTAATATGAAATAAAATTACACAGTAAGTCATTTAAAAAAAAAAAAAAAAAAAAAAAA60.26258205689277897No Hit
ATTTCAACTCAGTTCACTATAATTTTAAATGTTTAAGAACATCTTGCCAGTTGTTCTATCATGTTAAAGTT60.26258205689277897No Hit
GAGGGGCCTAGGGAGCCGCACCTTGTCATGTACCATCAATAAAGTACCCTGTGCTCAAACAAAAAAAAAAA60.26258205689277897No Hit
TGTCCGCAATGTTGCCAGTGTCTGTCTGCAGATTGGCTACCCAACTGTTGCATCAGTACCCCATTCTATCA50.2188183807439825No Hit
GGGCTGGCCCGTTTGGGACAGCTGACCAATAAACACTGATGGTGTGTTAAAAAAAAAAAAAAAAAAAAAAA50.2188183807439825No Hit
GCCGCACACAGGCCTAGAGGTAACCAATAAAGTATTAGGGAAAGGTGTGAAAAAAAAAAAAAAAAAAAAAA50.2188183807439825No Hit
ACTCGGTAGGCTGAGGCACGAGAATCGCTTGAACTGGGAGGTGGAGGTTGCAGTGAGCTGAGATTGCAGCA50.2188183807439825No Hit
GCTGTAGAAGTAGAAATAAATTTTCTTAAATAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.2188183807439825No Hit
CAGTTACTCTTTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.2188183807439825No Hit
AGCAAACCCAGGATGAAAGCCCTGTCTACTGTCTGGAGTTCAACAGCCAGCAGACTCAGCTCTTGGCTGCG50.2188183807439825No Hit
ATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCT50.2188183807439825No Hit
GGCTTCTCTTACCCCTATTGCCCCCGGCAATAAATTGTTTCTATATGCCAAAAAAAAAAAAAAAAAAAAAA50.2188183807439825No Hit
AAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.2188183807439825No Hit
GGTCCCGGGAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAA50.2188183807439825No Hit
ATATGAGGTCATGGCCGAGCAGAACCGGAAGGATGCTGAAGCCTGGTTCACCAGCCGGACTGAAGAATTGA50.2188183807439825No Hit
AAGATAACCATTGCAACCAGATATGCCGACTTGCATGCCTTGCCCATCATGTGCTACCAGCTCAGCCTGCA50.2188183807439825No Hit
CCCTTTTCTTGACTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.2188183807439825No Hit
GGCTGTGGGCACATGGGGCCCCGCAGGTTCCTTGGAGGAGCCCTGAGCTGGGAGGCAGCAAAGGCTGACCG40.175054704595186No Hit
GTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTTAAAAAAAAAAAAAAAAAAAA40.175054704595186No Hit
CTTCCACTATGTCCTATCAATAGGAGCTGTATTTGCCATCATAGGAGGCTTCATTCACTGATTTCCCCTAT40.175054704595186No Hit
AAATTAATGTAATAAAGTGAACTTTGTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.175054704595186No Hit
GAATGTTTTCATGAGATGTGACAATGATGCTGTATTTTAAGTCTTTTTGTGTTTCTTCTGGTTATTTGCCC40.175054704595186No Hit
GCACTCCAGCCTGGGTGACAGAGCAAAACTCTATCTTAAATGAATAAATAAATAAAAATGAAAAAAACAAA40.175054704595186No Hit
GCAGCACTCCCTGCTGAAGCGCCTGCGCAAGGCCAAGAAGGAGGCGCCGCCCATGGAGAAGCCGGAAGTGG30.13129102844638948No Hit
CCTAATGAAGCATCTGACACCTGATGATCCTATGAATAACAACAAACATTTTATGCATTTGAAATCTTATA30.13129102844638948No Hit
ACCCCGCAGACTGTCCTCCGGATAAACAGCATTGAGATTGCTCCGTGTTTGTTGTGATTACCGAGTTAATA30.13129102844638948No Hit
ATGTGAATGTGGGAAGTAATTTTAATCATATGTAATTGGTCACAAGGCCTAATTTGCAGTAACTATTGCTG30.13129102844638948No Hit
GAGCGAGACTCTGTCTCAAAAATAAAAAAAAAAAAAAAAAAAATTTTTAAAAAAAAAAAAAAAAAAAAAAA30.13129102844638948No Hit
GGGAAGCTGAAAGTCCCCGAATGGGTGGATACCGTCAAGCTGGCCAAGCACAAAGAGCTTGCTCCCTACGA30.13129102844638948No Hit
GAGCGAGACTCTGTCTCAAAAATAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAA30.13129102844638948No Hit
CATGTAGGTTGTCTAAAAATAAAATCCATTTAAACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.13129102844638948No Hit
CACCGTGAGGCCAAGATCCCCTCAGAAGGCAGGAGTGCTGCCCTCTCCCATGGTGCCCGTGCCTCTGTGCG30.13129102844638948No Hit
CGACGCGGGTGTCCATTAAAGAGCAGACTCAGCGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.13129102844638948No Hit
GTTGAGGAATGCTTGCAATGCTCATTGAAGGGATTTGCTTTGGGACTTTGTCATCTTCCAGAAAGGAAACA30.13129102844638948No Hit
ATCGTAAACATCCACGAGTGCTGTTGCACTACCATCTATTTGTTGTAAATAAAAGTGTTGTTTTCAAAGCC30.13129102844638948No Hit
GCTGCTGGTGTGGGGACTTCGGGTGGGCAGAGGCACCTTGCTGGGTCTGTGGCATTTTCCAAGGGCCCACG30.13129102844638948No Hit
GTTACTGATTTCATTTTCAATAAATGTAGGTTTGTTACATGAGTTTCCCAATAAAAAAAAAAATCAAAAAA30.13129102844638948No Hit
GTAAATGCTCAATAAATATTGATGATGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.13129102844638948No Hit
GTTATTACTTTGGTCATTATTGGAATATTTATATCTTAGCTGGCTGACCTTGCACTTGTCAAAAATGTAAA30.13129102844638948No Hit
GCCTAAGCCTCTCCCTCCAGCCAATAGGCAGCTTTCTTAACTATCCTAACAAGCCTTGGACCAAATGGAAA30.13129102844638948No Hit
ACTGTGGTCTATACAGAGTCAATATATTTTTTCAGAGAAAGTTATTCGCTCGATTTTTTCTGAATCATAAT30.13129102844638948No Hit

[OK]Adapter Content

Adapter graph