FastQCFastQC Report
Tue 7 May 2024
EGAF00002877716

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002877716
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences378
Total Bases26.8 kbp
Sequences flagged as poor quality0
Sequence length71
%GC28

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA12934.12698412698413No Hit
GTTGACATCTGACCTGACATTTGCCTATGAACGTTTGTCACACTTCCGCT369.523809523809524No Hit
CTCAAATGAGATATCTATATCCCTACAACCTAATTGTATATTGAGCAGAA225.82010582010582No Hit
CCGGATCACCTGTTTGAAACCATCTCCCAAGCCATGCTGAATGCTGTGGA215.555555555555555No Hit
GTTCCCTTTGGGTTCCATGTTTTCCTTGTTCCCTCCCATGCCTAGCTGGA143.7037037037037033No Hit
CAAGAAGCCTGATGCCAAGTAGCTCCAGGGAACGCATGTGGATCCTAGAC123.1746031746031744No Hit
CAGGAGGAAATAGGACCAAGACCCCTGGACCTGGGGCCCAGTCGGCCCTC82.1164021164021163No Hit
ATTTCCAGTATGTTAAGTAACACACTTATTTTTGCCTGTGTATGGAGAGA41.0582010582010581No Hit
CTTCAGGAGAAGCACGCCATGAAACAGGCCGTCATGGAAATGATGAGTCA30.7936507936507936No Hit
GCCTTGTGATTGTCCAAACTATCCCAAGAATAAATGTGTTCCAAATGGAT20.5291005291005291No Hit
GTTCTGCAGGCTGTACAGGAAGCATGGCTGGGGAGGCCTCGGGAAACTTA20.5291005291005291No Hit
ACACACTTATTTTTGCCTGTGTATGGAGAGATTCAAGAAATAATTTTAAA20.5291005291005291No Hit
GTCCCAGCTGCGCGTCGCCAAAGTGACAGGCGGTGCGGCCTCCAAGCTCT20.5291005291005291No Hit
ACCCATGTGAGGGAATAAACCTGGCACTAGGTAAAAAAAAAAAAAAAAAA20.5291005291005291No Hit
ATACTAAATTATTCCATTTGCAACTTATCCCCAACAGTTGGTGAAGCAGT20.5291005291005291No Hit
GATTTCTAGATTATAATATTCTCCCACCAGTATTTTTTCTTAATAACCTT20.5291005291005291No Hit
CAATAAATTTTTTTTGGTCAAATTTAAAAAAAAAAAAAAAAAAAAAAAAA20.5291005291005291No Hit
CCCGTAGTCCCAGCTACTCCGGGCTGAGCCAGGAGAATGGCATGAACCTC20.5291005291005291No Hit
ATACTAAATTATTCCATTTGCAACTTATCCCCAACAGGTGGTGAAGCAGT20.5291005291005291No Hit
GGCTAAAATGGTGAAACCCCGTCTCTACTAAAAAAAAAATACAAAAAATT20.5291005291005291No Hit
GGTGGTCTCCTCTGACTTCAACAGCGACACCCACTCCTCCCCCTTTGACG10.26455026455026454No Hit
ATATATGTCTTTGTATACATTACGACCATTGTGATTATCCATTAAATCCA10.26455026455026454No Hit
CTTCAGGAGAAGCACGCCATGAAACAGGCCGTCATGGAAATGATGATTCA10.26455026455026454No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATA10.26455026455026454No Hit
GGTGCATTGGAGTGCTTTGCTAGGCGCTGCTGGTGGGGCACCCACCCTTT10.26455026455026454No Hit
CCTGTGTACCATGCACTGAGTGACTGTGGGGATCATGTTGTAATAATGAA10.26455026455026454No Hit
GGGGAATGGGGGGGGGGGCGGACAGGAGAGGGCGGGGGGCGGGGGGGGCG10.26455026455026454No Hit
ACCCTACTCCTCCAGCAGCAAGTGCCTAAAAACAAACCAAGATGTAAATG10.26455026455026454No Hit
CTACTCTTGACAGCAGGATTGGATGTTGTGTATTGTGGTGTATTTTATTT10.26455026455026454No Hit
CGACGCGGGTGACCACGTTGGTGTTATTTTTTTGGTGTTGGAATTTTTAA10.26455026455026454No Hit
AGCCCAGACAAAGCCCAGGCCTGTCAAGAGACGCAGAGGGCCCCTGCCAG10.26455026455026454No Hit
ACATCATCTTACCTAGCCCACCCAACCTTATAAACATGATAATTGACAAA10.26455026455026454No Hit
GTTGACATCTCACCTGACATTTGCCTATGAACGTTTATCACAAATCCGCT10.26455026455026454No Hit
ATTACCAGTATGTTAAGTAACACACTTATTTTTGCCTGTGTATGGAGAGA10.26455026455026454No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.26455026455026454No Hit
GGGTGGCCGGCATTCACAAGAAGGTGGCCCGGACCATCGGCAGTTCTGTG10.26455026455026454No Hit
AGATAGGATTGGGAAAGAAGTTGCTAAGTGTGCTTAGTTTTAATAAGTAA10.26455026455026454No Hit
ATTATAATGCAAATACTTTTTAACTTAGAGGCAATGGAAAAATAAAAGTT10.26455026455026454No Hit
CTTGTTGATCAGTGTTGAAGAAAGTGCAAAAGGAACTTTTATATATTTGA10.26455026455026454No Hit
TCCCTACACGACGCGGGAGTCCGAGTGGAGAGAGCGAGCTGAGTGGTTGT10.26455026455026454No Hit
GGCTAAAATGGTGAAACCCCGTCTCTACTAAAAAAAAATTACAAAAAATT10.26455026455026454No Hit
GGAATGCCACACCCATGGGGCCCCCGGTTACCCTGGAGCGTGTGCCCGCG10.26455026455026454No Hit
GCACTCCAGCCTGGGTGACAGAGCAGGAAGCTGTCTCAGAAATAAATAAA10.26455026455026454No Hit
TCATGAAGCCCCTTCCCACAAGGAAACCAGGAGGGAGACTGCGAGTGAGT10.26455026455026454No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAA10.26455026455026454No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCATAAAAATCTTAGAAATA10.26455026455026454No Hit
CAGGAGGAAATAGGACCAAGACCCCTGGACCTGGGGCCCAGGCGGCCCGC10.26455026455026454No Hit
CTCTGTTTCCCGCCTGGGCCATCCAACCTTGAAGTCCTAAACCACACCTC10.26455026455026454No Hit
ACTATAAGTAGTTGGTTTGTATGAGATGGTTAAAAAGGCCAAAGATAAAA10.26455026455026454No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCGAAAAAACTTTGAAATA10.26455026455026454No Hit
TCTACAGCCTCTGCCCTGGTCGCATAAATTTTTCTGTGTACACAAGCAAT10.26455026455026454No Hit
TTCCCTACACGACGCGGGTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.26455026455026454No Hit
TCCCTACACGACCCGGGATCATAATTTGGAGGGAAGCTCTTGGAGCTGTG10.26455026455026454No Hit
CAGGAGGAAATAGGACCAAGACCCCTGGACCTTGGGCCCCGACGGCCCTA10.26455026455026454No Hit
ATCTCAAAACAAAACATAAAATATTTGTATTAGATCAGTAGTTTCAAGAT10.26455026455026454No Hit
CCGGATCACATGTATGAAACCATCTCCCAAGCCATGCTGAATGCTGTGGA10.26455026455026454No Hit
TCTACAGCCTCTGCCCTGGTCGCATAAATTTTTATGTTTACTAAAACAAT10.26455026455026454No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAA10.26455026455026454No Hit
CGTTCCTTGTTGCCACTTTGGGTATTCTGAGATTTTCTCTTGCATGCCCT10.26455026455026454No Hit
ACATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.26455026455026454No Hit
GAATAAACTTGTTATTATGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.26455026455026454No Hit
GTCCGGCAGGCCTACCCGGCAGATGACACCTATGAAGCCCTGTCCAACAA10.26455026455026454No Hit
CAGGAGGAAATAGGACCAAGACCCCTGGCCCTGGGGCCCCGTCGGCCCGC10.26455026455026454No Hit
TCTACAGCCTCTGCCCTGGACGCAAAAAATTATCAGAATACTCAAGCAAA10.26455026455026454No Hit
GTTTGTTCTTGGTGCCTTGCAGAGAGACTCACAGCAACTCTCCATTATAG10.26455026455026454No Hit
GGGGTGCACATGGGGCCTGCTCACCTTGCCCACGCGTCTCCAGCCAGCCA10.26455026455026454No Hit
CAATAAATTTTTTTTGGTCAAATTAAAAAAAAAAAAAAAAAAAAAAAAAA10.26455026455026454No Hit
ACCCATATCCCTCCCGTGTGTGGTTGGAAAACTTTTGTTTTTTGGGGTTT10.26455026455026454No Hit
CCGGATAACATGTTTGAAACAATCACACAATCCATTCTGAATTCTGTTGA10.26455026455026454No Hit
GAGAGTCTTCGGGAGAGGAGGAGGAGTAGGGCCGCCTCGGGGCTGGGCAA10.26455026455026454No Hit
TTGCCGATCTGAGCGCTTGGCCAAGTACAACCAGCTCCTCAGAATTGAAG10.26455026455026454No Hit
CGCCGCGGGGGACCACTTTGGTTTTAGTTTTTTGGGGTTGGAGTTTTTTT10.26455026455026454No Hit
GCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAACGGCTA10.26455026455026454No Hit
AAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.26455026455026454No Hit
AAACAAGACGGCCGTGGGTGTGGGGACCATAAAAGATGAAGAGAGGGATA10.26455026455026454No Hit
CCGGATCACCTGTGTGAAACCATCTCCCAAGCCATGCTGAATGCTGTGGA10.26455026455026454No Hit
CCGGATCACCAGTTTGAAACCATCTCCCAAGCCATGCTTAATGCAGTGGA10.26455026455026454No Hit
CAGGATCACCTGTTTGAAACCATCTCCCAAGCCATGCTGAATGCTGTGGA10.26455026455026454No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAGAAAAAAAAAAAAA10.26455026455026454No Hit
CGACGCGGGGGACCACTTTGGTTTTATTTTTTTCGTGTGGCAGTTTTAAG10.26455026455026454No Hit
CCGGATCACCTGTTAGAAACCATCTCCCAAGCCAAGCTGAATGCTGTGGA10.26455026455026454No Hit
TAAATCACCTCTTCCGCTGTGTTTAGATAAAAAATTAAAACAAAAAAAAA10.26455026455026454No Hit
CTTCCTCGCTTTCCTTCCTACCTAGCTCCTTGTTGGTGAGCTTCTTGTGC10.26455026455026454No Hit
CCCCAATGCCCAGCGGGCCTTTACTGATGATCCAAAGCAAAATTAACAAT10.26455026455026454No Hit
GAATGTATCAGAATAAATGTTTTTAACAGAAAAAAAAAAAAAAAAAAAAA10.26455026455026454No Hit
CTTCAGGAGAATCACGCCATGAAACAGGCCGTCATGGAAATGATGAGTCA10.26455026455026454No Hit
GTAATGGTATCTTTGAGCTGATTGTTCTAATCAGAGCTGGTACCTACTTT10.26455026455026454No Hit
CATATAGGTATATTCTGAATACAAGCTTATTCACATTTTGCTTCCTAATC10.26455026455026454No Hit
GGTGGTCTCCTCTGACTTCAACAGCGACACCCACTCCTCCACCATTGACG10.26455026455026454No Hit
GTGGGGCTGGCCTTCCGGGCAGATGACACCTTTGAGGCCCTGTGCATCGA10.26455026455026454No Hit
CATCTCTCCTTGCCAAATAGTTTGTGCCTAGTCTTGAAGGTGGTTGCTCC10.26455026455026454No Hit
ATAGGGGCCTTGTAATCCGATCTGAATGTTTCCTAGCGGATGTTTCTTTT10.26455026455026454No Hit
CCGGATCACCTGTTTGAAACCATCTCCCAAGCCATTCTAAATGCTGTGGA10.26455026455026454No Hit
CTCAAATGAGATATCTATATCCCTACGGCCTAATTGTATATTGAGCAGAA10.26455026455026454No Hit
GTTCCCTTTGGGTTCCATGTTTTCCTTGTTCCCTCCCATACCTAGCTGGA10.26455026455026454No Hit
GTTACATGCACATCGTCCTAGAATTAATTCCCCTAAAAATCTTTTAAATA10.26455026455026454No Hit
ACTGACTTCTGACCTGACATTTAGTATAATAAAAATGAAATTCTTAACCA10.26455026455026454No Hit
GTTCCATTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.26455026455026454No Hit
GGTGCATTGGAGTGCTTTGCTATGAGCTGCTGGTGGGGAACCCACCCTTT10.26455026455026454No Hit
AAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAA10.26455026455026454No Hit
GTATAGATGGATCCTAGTCCTTTTCATTACCTGATGGTAGAAATAAAATA10.26455026455026454No Hit
CGACGCGGGGGACCACTTTGGTTTTATTTTTTGGGTGTGGCAGTTTTAAG10.26455026455026454No Hit
ATACTAAAAAAAAACATTAACAACAAAACCCCAACACCAAAAAAAACAAA10.26455026455026454No Hit
CAGGAGGAAATAGGACCAAGACCCCTGGACCTGGGGCCCAGTCGGCCCGC10.26455026455026454No Hit
TCCCTACACGACGCGGGTGCCTCAGTGTTGGCCAAACTCTGGAGTCACTG10.26455026455026454No Hit
GCCTTAGGATGCAGCATGCCTTCAGGAGACACTGCTGGACCTCAGCATTC10.26455026455026454No Hit
GGTTATGGTTTAATGTTACAACAACTATTTTTTAAGAAAAACAAGTTTTA10.26455026455026454No Hit
GTGTGCACTTGCTGTTTTCCCTGTCCACATCCATGCTGTACAGACACCAC10.26455026455026454No Hit
TCTACAGCCTCTGCCCTGGTCGCATAAAATTTTCTTTTTAAACAAACAAT10.26455026455026454No Hit
GTTGACATCTGCCCTGACATTTGCCTATGAACGTTTGTCACACTTCCGCT10.26455026455026454No Hit
CACTAGGGGATGGAGCAAGCCTGTGACTCCAAGCTGGGCCCAAGCCCAGA10.26455026455026454No Hit
GGAATGCCACAACCATGGGGCCCCCTGTGACCCTGGAGAGTGTCCCCGCT10.26455026455026454No Hit
TAGTTATGTCATCCCTCTTATTAATCATCATCCTAGCCCTAAGTCTGGCC10.26455026455026454No Hit
GTTGACATCTGACCTGACATTTGCCTATGAACGTTTGTCACCCTTCCGCT10.26455026455026454No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAA10.26455026455026454No Hit
TCTACAGCCTCTGCCCTGGTCGCATAAATTTGTCTGTGTACTCAAGCAAT10.26455026455026454No Hit
ACCCGAGATGGTGGGCAACATGGTGGGCGTCTACAACGGCAAGACCTTCA10.26455026455026454No Hit
GAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.26455026455026454No Hit
CATTAACACTATTCTCACCAGACCTCCTAGGCGACCCAGACAATTATACC10.26455026455026454No Hit
ATAAAGAACTGAACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.26455026455026454No Hit
GTTCATTCCCTGCAGTGTCGGCATTGTAAATAAAGCCTGAGCACTTGCTG10.26455026455026454No Hit
CGACGCGGGGGACCACTTTGGTTTTATTTTTTTCGTGTTGCAGTTTTAAG10.26455026455026454No Hit
CGACGCGGGGGACCACTTTGGTTTTGTTTTTTTAGTGTGGGAGTTTTTAT10.26455026455026454No Hit
GGATGGGGGGGGGTGAGTGGGGGGAGGTGGGGGTGTGGAGAGGGGTGTGA10.26455026455026454No Hit
GATTCATGCCCATAGTCATAGAATTAATTCCCATAAAAATCTTTAAAATA10.26455026455026454No Hit
ACCCGAGATGGTGGGCAGCATGGTGGGCGTCTACAACGGCAAGACCTTCA10.26455026455026454No Hit
ACCGGGGGTATACTACGGTCAATGTTCTGAAATCTGTGGAGCAAACCACA10.26455026455026454No Hit

[FAIL]Adapter Content

Adapter graph