FastQCFastQC Report
Wed 8 May 2024
EGAF00002877808

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002877808
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences138358
Total Bases9.1 Mbp
Sequences flagged as poor quality0
Sequence length66
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA77705.615866086529149No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10680.7719105508897208No Hit
TCCCTACACGACGCGGGGGAGCCATTGTGGCTCCGGCCGGTTGCGCGGGC2230.16117607944607468No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)