FastQCFastQC Report
Wed 8 May 2024
EGAF00002877809

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002877809
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences202249
Total Bases13.3 Mbp
Sequences flagged as poor quality0
Sequence length66
%GC39

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA96094.751074170947693No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11690.5780003856632171No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATA5710.2823252525352412No Hit
GGGGTATACTACGGTCAATGCTCTGAAATCTGTGGAGCAAACCACAGTTT2150.10630460471992445No Hit
GTATACTACGGTCAATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCAT2110.10432684463211189No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)