FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002877988

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002877988
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3386
Sequences flagged as poor quality0
Sequence length71
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAG962.835203780271707No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA611.8015357353809804No Hit
ATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCT381.1222681630242175No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG361.06320141760189No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAA310.915534554046072No Hit
GCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTCACCCACCACATTAACAACATAAA270.7974010632014176No Hit
GAGGAACAGCTCTTTGGACACTAGGAAAAAACCTTGTAGAGAGAGTAAAAAATTTAACACCCATAGTAGGC170.5020673360897815No Hit
AAGTACATAAACTCCAAACAGTGGGAAAAGAATAGAAAAATAAAAATAATTGCTCTAAAACACCCAAGAAT100.29533372711163614No Hit
CTTTGCACTTAAAAATTAGCATGCTGCTTTTTGTACTTGGAAGTGTTTCAAAAAATTATATGACCATATTT90.2658003544004725No Hit
GTCAGGAGCTGCTCTGGTCATTCCCTTGTATGAACTGGTCTAAAGACTGTTAGTGGGGTGTTAGTTGATTT80.23626698168930893No Hit
CACCATAGAAACATGACAGCTTCTCCATAGAGCTTTTGTAAGTACATTGTAATTTTCACTTCATTGATGTG80.23626698168930893No Hit
ATTAAAGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGTAATCCAGGTCGG80.23626698168930893No Hit
GCTAAGATGTGTTTGTACTTTGGATCTGCATTTGCTACACCCTTCCTTGTAGTAAGACACCAACTGCTTAA70.2067336089781453No Hit
GTGTGACAAAAGAAAATACATGTAGACAATTCAACAGTCTCATAAAAACAATACGAGACTTAGATAAGAAA70.2067336089781453No Hit
GTTTCAGGTGGTTTTAAAGAACACGTGGAAATCCCTTGAATTTAGGACCTGGTTAACCAGAAAGATAAGAC70.2067336089781453No Hit
GAATTTGGGATTATTCCTCTGTTTGAAAAAAGAGGCTTGCTGTAATGTCACAGGAAACCTTTTAAAAGTGG70.2067336089781453No Hit
CACAACTTCTTAAGCTAAATGGTATTTTCATTTTTCTCAAGCTCTCCAATAAATATGACCACCAAGATGCA60.1772002362669817No Hit
GGAACAGGTTGAACAGTCTACCCTCCCTTAGCAGGGAACTACTCCCACCCTGGAGCCTCCGTAGACCTAAC60.1772002362669817No Hit
TGTTGTTATCACATAGTCATACTTGGTTGTAATATGTGATGGTTAACCTGTAGCTTATAAATTTACTTATT60.1772002362669817No Hit
GTATCCAGGTTCCCTCCCAGAGGAGCCACCAGTTCTCATGGGTGGCACTCAGTCTCTCTTCTCTCCAGCTG60.1772002362669817No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACACTATAG60.1772002362669817No Hit
CTCTTCTAAGCATTGGAGAACACCAGTGAGCAAAAAAGAATTTCTGACCTTGGGAGCTGACATTCTATTAA60.1772002362669817No Hit
GGTTCTTAAGGGATTCTCCGTTTTGGTTCCATTTTGTACACGTTTGGAAAATAATCTGCAGAAACGAGCTG60.1772002362669817No Hit
GGCCTCACACACTCCACATCTTCCATCTGAATTGCCTCCTAGATATGAAGAAAAAGAAAATGCTGCAGCTA60.1772002362669817No Hit
GTGTATCCTTTCCAAAAAGAGTAATAGTTGTTTACTAGTGTGCTAGATGAAAAGCGTGCAATATGCTTTAA60.1772002362669817No Hit
GGTCACAAGAGGGAGATCGAAAGTATAATTACATAGTGTCTTTCCTTCTTTGACATACAATTGGGTTGAGG60.1772002362669817No Hit
TTCGTAGGATGGGTGAGTCAGATGATTCCATTCTCCGATTGGCCAAGGCCGATGGCATCGTCTCAAAGAAC60.1772002362669817No Hit
GGGCCCTGAAGCGCGTACACACCGCCCGTCACCCTCCTCAAGTATACTTCAAAGGACATTTAACTAAAACC60.1772002362669817No Hit
GATTTAGGTTGCTGTTAATTTTGTCATGAGAATGTAAAATACTAAAATCTCTAAGTGAAAAATTTGCATAC60.1772002362669817No Hit
GGCTAATGCGGTACCGGCTAGCGTGGCTTCTGCACCCCACACTGCCCAGCACCTTCCGCTCAGTCCTCGGC60.1772002362669817No Hit
ATCTTACAATAAACAAGAAGAAAAAGGGAGGAAAAGGAGAATGAGGGAGGAAAAAATAACAGTAGGAAATG60.1772002362669817No Hit
CCTGTAGTTGAATATGATTTGGTCAGTTGCTCGTTGTAACTTGGAGAAATTCCTATAAAGTAAGATCTCCT50.14766686355581807No Hit
GTATAAATGGAATGTTGTGGAGATGACCCCTCCCTGTGCCGGCTGGTTCCTCTCCCTTTTCCCCTGGTCAC50.14766686355581807No Hit
GGCTAATTCATAACCTGTCTTAAAAATGTTTGAAGTGGTATCAAGAGCATTGTTTATGCATGTTGTGATAC50.14766686355581807No Hit
CACGTGATTGTGTGACTCCATGTGCATAGGTCATGGTAGGTGTGTATGTGACTGTGATTACCTCCATCAGT50.14766686355581807No Hit
GCTGGGAATAAAATTCTGGGTATTCTCGTATTCTCATTTAAAGGAGTTTAGCTTTCAGAGAGAAACAGCAG50.14766686355581807No Hit
ACTATACTCAAACTCCAAGTTTAGCCAGGACAAACAAAATGATAAAAAGAAAAATTACTGCAAACAGGGCA50.14766686355581807No Hit
GAGGATCCAAGTATTTTAGAACATGCTCAAGAGGTGAGCACTTAACAATAGAGTTTGAGAATCTAGTAGAA50.14766686355581807No Hit
TTTGACGTGCAACTCAAAGACCTGGAAAAATGGCAGAATAATCTGCTTCCATCCCGCCAGTTTGGTTTCAT50.14766686355581807No Hit
CCTGTTTAGAATTATAAAAATCATTTCATTTGGCCCAGCCCATACTGCCCAAGACAAAACTTCCAGACAAT50.14766686355581807No Hit
TTTTAATATAGTTATCTCTACCACTTTCTTTTCTAGTTTCTTGATTTTCAGCTCAGGCTGCATTCTAACTC50.14766686355581807No Hit
ATTACAGGATAACTTACTATAAGAAACCATGGATAGTTTAATATCAGAAATACTACAATTCAACAAATTAA50.14766686355581807No Hit
CCACTGCTGCTGCTCCAGCTGAGGAGAAGAAAGTGGAAGCAAAGAAAGAAGAATCCGAGGAGTCTGATGAT50.14766686355581807No Hit
GCGACTTCTGAAGGGCCCCTTGCAAAGTAATAGGGCTTCTGCCTAAGCCTCTCCCTCCAGCCAATAGGCAG50.14766686355581807No Hit
GTCTTTTGAATGGGCCCACAGTGTTTATGTACTCTTAACAACTCACAGAATAATACATGTTCACTTTATTT50.14766686355581807No Hit
CTCCTAAACACATCCGTATTACTCGCATCAGGAGTATCAATCACCTGAGCTCACCATAGTCTAATAGAAAA50.14766686355581807No Hit
GTTTAGAGTTGTAGGTATTAACTAGAATATAAATCCTTAGAAATTGTCTTTATACCTTCAAAAATTATACT50.14766686355581807No Hit
GACTTTTACAAAGCTTGATCATTTATACGTTAAACTCAAGTATTGTACAGTCATGTTTGTATTCAGATTTC50.14766686355581807No Hit
CGTCTCTAGTGTTGCGAACACTCTATGTTTCGAGCTACCTCCCACACCTGTCTGTGCACTTGTATGTTTTG50.14766686355581807No Hit
GCTAAAGCACACAAATAAAAGAGTTCCTGATCACCTGAACAATCTAGATGTGGACAAAACCATTGGGACCT50.14766686355581807No Hit
GATTCTCAGCCACCTAGTTTTTCCTATGCTTGAAAAAAAGCAATAAACCTCCTTTTTAGGTTTGCATGTTT50.14766686355581807No Hit
GGTTAGAAAAAAATAACCACAATACTATCTTAACATAAGAAACAGCCTTCCTAATAGAAGTACATGATGGC50.14766686355581807No Hit
CCTTGTCTGTGGACCATGATAAGCCCAAGTAGTGACTTCAGAGCTGAGTAACAGAAATTAAAGTGAAAAGA50.14766686355581807No Hit
ATGTTAACAGGTATTTTCACAGGTTTGTTTCTTGATAGTTACTCAGACACTAGGGAAAGGTAAATACAAGT50.14766686355581807No Hit
ACCTGGCAGCTATAGAATACACTATGTGCATTTATAATAGCTATTTTATATATTGTAGTATCAACATTTTT50.14766686355581807No Hit
CCATCTCCCAGAACAGGCCTTCTATATGGTGGGACCCATTGAAGAAGCTGTGGCAAAAGCTGATAAGCTGG50.14766686355581807No Hit
CAAAAATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.14766686355581807No Hit
GTGAAGAAGCTGGAAATGAAGCCAAAGTACCCGCACTGCGAGGAGAAGATGGTTATCATCACCACCAAGAG50.14766686355581807No Hit
GCTTCCTAGATAGAAACCAAAGCAGTGCAAGATTCAGTTCAAGGTCCTGAAAAAAGAAAAACATTTTACTC50.14766686355581807No Hit
ATGTTATCTACATTGAACGGGTGCAGCGGGAAAAGGCTAATGGCACAACTGTCCACGTAGGCATTCACCCC50.14766686355581807No Hit
GTTTATTAATGAGGTGACTTTCACCTTAGGACAACTGTTGCATGCCAAGTTTTTTGTGTGTGTGAAACACT50.14766686355581807No Hit
GGTACTCGTACACTATTTTTTTGTACTGCTGGTCCTGTACCAGAAACATTTTCTTTTATTGTTACTTGCTT50.14766686355581807No Hit
GCACCGAACACTTAAGGGTGTGGTTTGTAAGTACGATCTGTAAAATAACTGGGATGAATTCCCATGTATAC50.14766686355581807No Hit
GTTTTAAAAGAATTAGTGTGAGTGTGTTTTTGTATGAATGAGCCCATTCATGGTAAGTCTTAAGCTTGTTG50.14766686355581807No Hit
GGTGCTGCACCAGCAGGAGGTCCTGCCCCCTCCACTGCTGCTGCTCCAGCTGAGGAGAAGAAAGTGGAAGC40.11813349084465447No Hit
CTTTGACTTCTTGCATGCGAGGGACCATTGCGTGGCCCACAAACTCTTTAACAACTTGAAATAAATGTGTG40.11813349084465447No Hit
CCTACAGTTACTGGTTCCAAAAACTGAGATATGTGAGGAAGCTGAAAAACCCCTCATCATATCAGAAAGAA40.11813349084465447No Hit
GGGTTTACGACCTCGATGTTGGATCAGGACATCCCGATGGTGCAGCCGCTATTAAAGGTTCGTTTGTTCAA40.11813349084465447No Hit
GGCCGTTAGGAATCCATTCTCACTGTGTTCGCTCTAAACAAAACAGTGGTAGGTTAATGTGTTCAGAAGTC40.11813349084465447No Hit
GACACTAGGAAAAAACCTTGTAGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCTAAAAGCAGCCACCA40.11813349084465447No Hit
ATATTGTTTTAAGTAAACACATTTTTAAAAATTGTGTTAAGTCTATGTATAATACTACTGTGAGTAAAAGT40.11813349084465447No Hit
AGATTCCTCAAAATATTTTCTGTTAATAAATTGCCTTCATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.11813349084465447No Hit
GAAAAGCTGGTCTGGAGTTGCTGAATGTTGCATTAATTGTGCTGTTTGCTTGTAGTTGAATAAAAATAGAA40.11813349084465447No Hit
ACAGTGGAGGATCCAGGTCTTGGGGAGCTCAGGACTTGGGCTGTTTGTAGTTTTTTGCCTTTTAGACAAAA40.11813349084465447No Hit
GTGTACGACCGAGATTAGGGTGCGTGCCAGCTCCGGGAGGCCGCGGTGAGGGGCCGGGCCCAAGCTGCCGC40.11813349084465447No Hit
GAAACTGGATCCTGGCAGCGAGGAGACCCAGACGCTGGTTCGAGAGTACTTTTCCTGGGAGGGGGCCTTCC40.11813349084465447No Hit
TTTCCTCTCTCTGTGTGCATTACCAATATCTAAGTGTAAAATTAATAAATTGTTTTGAATTCCTGGAAAAA40.11813349084465447No Hit
GCCCCTGTGGCTGCTGCCACCACAGCTGCTCCTGCTGCTGCTGCAGCCCCAGCTAAGGTTGAAGCCAAGGA40.11813349084465447No Hit
GTGTCCCTCTGCCCCCTTCCATCCCCAACCACATTTGACTGTAGCATTGCATCTGTGTCCTGTTGTCATTT40.11813349084465447No Hit
GTTTAATGCATCTTGCCTTATCTTTTTTTATTACTGTGTACAAAGATTTTTTTACACAAAGAAACTTAATG40.11813349084465447No Hit
AGCATGCAGTTCTCTGTGAAATCTCAAATATTGTTGTAATAGTCTGTTTCAATCTTAAAAAGAATCAATAA40.11813349084465447No Hit
AGCTACCAAGAAACCAGCCCCTGAAAAGAAGCCTGCAGAGAAGAAACCTACTACAGAGGAGAAGAAGCCTG40.11813349084465447No Hit
CATCGACCAGGGGACAGGACTTCCAGAATGGTGGAGTGAAGAGCTCAGTAAGTCCTCTCCATCAAAAGCAA40.11813349084465447No Hit
ATTGACAAGGATTTTCTACAAGGAATATGTCTTACCCCTGACTGTGAAGGTGTCATTTCTAAGATTATCAT40.11813349084465447No Hit
CTCTTATATTATGTTTTGTGGAAATCAGCACACAACCACAATGACATTTAAGCACAGGATCATTATTAGTC40.11813349084465447No Hit
GCTTTTGGACTTCGGCAGTCTGTCCAACCTTCAGGTCACTCAGCCTACAGTTGGGATGAATTTCAAAACGC40.11813349084465447No Hit
GGGAGAATTGCGTCATTTAAAGCCTAGTTAACGCATTTACTAAACGCAGACGAAAATGGAAAGATTAATTG40.11813349084465447No Hit
CAACGGCAGCAGCAGCAATTGAACAATCTTGAGCATAGAAAAGAAGTCAATGTAAACGAAGTTAAGATCAA40.11813349084465447No Hit
GTTTGTCACTGACTTGTGTTCCTGAACTATGACACATGAATATGTGGGCTAAGAAATAGTTCCTCTTGATA40.11813349084465447No Hit
GAGCTAAACCTCTTCCACTAGAAGATTCTCAACTGGAGCCAGCCTTCAGACTCAGTGGTTGTTTCAGAGGA40.11813349084465447No Hit
CTGAGGACTGTTGCTGTATTGATTAGGAAAAGAGACAGAGTAATTTGCAGTTTGTTTGATTTATACTTTTG40.11813349084465447No Hit
GGTTGTATATAATGTCAGGTTTGGGTCTTGGGTTCAAGTGTATATATTCCTGTAAGTTTCTTAACTGCATT40.11813349084465447No Hit
GATTATTTCTGTAAATGAAATTGGTAGAGAACCATGAAATTACATAGATGCAGATGCAGAAAGCAGCCTTT40.11813349084465447No Hit
GTACAAACAGATCCTACTGATGAAATTCCCACTAAAAAGTCAAAGAAGCATAAAAAGCACAAAAACAAAAA40.11813349084465447No Hit
GTTACAGTGTATTATGTAGCATGCAATGTGTTATGTAGTGCTTAATAAAAATAAAATGAAAAAAAAAAAAA40.11813349084465447No Hit
CATAAAGGTTCATTTGGACAAAGCACAGCAGAACAATGTGGAACACAAGGTTGAAACTTTTTCTGGTGTCT40.11813349084465447No Hit
GCCTGCCCCCGCTAACCGGCTTTTTGCCCAAATGGGCCATTATCGAAGAATTCACAAAAAACAATAGCCTC40.11813349084465447No Hit
GCTCTTAGTCTAAACCTGTGGCCTCTGCCACGTGCTCCCTGCCAGCTTCCCCCCTGAGGTTGTGTATCATA40.11813349084465447No Hit
ATAATTACATCACAAGACGTCTTGCACTCATGAGCTGTCCCCACATTAGGCTTAAAAACAGATGCAATTCC40.11813349084465447No Hit
CACAGGCTTCCACGGACTTCACGTCATTATTGGCTCAACTTTCCTCACTATCTGCTTCATCCGCCAACTAA40.11813349084465447No Hit
GTGTTTTCCTTGTTAACTAAAACAGACATGGGCTTTGATTTTTTTCATACTATTAGACCATATCTCATAAA40.11813349084465447No Hit
GCTTCTTCGAATTTGCAATTCAATATGAAAATCACCTCGGAGCTGGTAAAAAGAGGCCTAACCCCTGTCTT40.11813349084465447No Hit
CTAGCATTGTAAAATTATTTCATGATTAGAAATTACCTGTGGATATTTGTATAAAAGTGTGAAATAAATTT40.11813349084465447No Hit
ATTGGATATTGAGTTTACAAAGCATTTGCATGAAAAAGTGAATATCATCCCACTTATTGCCAAAGCAGACA40.11813349084465447No Hit
GAATAAGCACAAGAGAAAGAAGGTTAAGCTGGCTGTCCTGAAATATTATAAGGTGGATGAGAATGGCAAAA40.11813349084465447No Hit
GATTGGCATTATTGAACATAGTATCTCTTGCTACTGCTGTACCGTGCACCAGTCATCAAATCAAAACATCT40.11813349084465447No Hit
GTATTGCTCTGAAGAAGCAGCGTACCAAGAAAAATAAAGAAGAGGCTGCAGAATATGCTAAACTTTTGGCC40.11813349084465447No Hit
GGTTGGAATTACATTTTTATTGATTGTTTGGATCAGAGCTCAGTTCCTGTAGAAAACGAACTGTAAAAGAC40.11813349084465447No Hit
CCAGTGAGCTCAGGTGTCTCAAAGAAGGGTGGAAGTTCTAATGTCTGTTAGCTACCCATAAGAATGCTGTT40.11813349084465447No Hit
GTTCTACCGTACAACCCTAACATAACCATTCTTAATTTAACTATTTATATTATCCTAACTACTACCGCATT40.11813349084465447No Hit
GTTACATATTTGATTGAAAGTCTTCAATTTGTTAACAGAGCAAATTTGAATAATTCCATGATTAAACTGTT40.11813349084465447No Hit
TAATTGCAGTATTGTCTTCATTTTTGCAAATAAAGAGGGAAAAAAAATCCTATGTATCTTAGAGAATTGTG40.11813349084465447No Hit
GCCCTCACGGAGGCGGGGGTTCCAGGGCACGAGTTCGAGGCCAGCCTGGTCCACATGGGTCGAAAAAAAAA40.11813349084465447No Hit
CTTCAGGAGGAAGCAGCACTAAAAGCACTCTGAGTCAAGATGAGTGGGAAACCATCTCAATAAACACATTT40.11813349084465447No Hit
GTAAGAAACCTAGGACCAAAGCACCCAAGATTCAGCGTCTTGTTACTCCACGTGTCCTGCAGCACAAACGG40.11813349084465447No Hit
ACTGGGACTTTTGGAGGGTGGAGGGTGGGAGGAGGGAGAGCAGGAGAAACAATGAATGGGTACTAGGATTA40.11813349084465447No Hit
GGCTTTGGAGTCCTCTTCCTGCTGCTCTGGGTTGGCATCTACGTGTGAGCACCCAAGGGTAACAACCAGAT40.11813349084465447No Hit
TGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTT40.11813349084465447No Hit
GGAGAATCACTTGAACGCGGGAGGCGGAGGTTGCAGTGAGCCAAGACTGCTCCATTGCACTCCAGCCCGGG40.11813349084465447No Hit
ACATTGTATAGGATGTGGTAATTAGCTTGTAACCAGGGTATGATCTGCTATTGTTATTTCTCCTCTTTATT40.11813349084465447No Hit
GAGCATTTCGACATACAAGCACCCTGGCAGCTATGAAGTTGATGACAGCTTTGGTGAATGTGGCACTAAAT40.11813349084465447No Hit
GCTTCATTTCCCAAGAAGCAGGAGTGACTTCAGTCATCCCAGCAATTGCTTGGTTCAGTTTCATTCAGCTC40.11813349084465447No Hit

[OK]Adapter Content

Adapter graph