FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002878188

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002878188
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25962
Sequences flagged as poor quality0
Sequence length71
%GC40

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG600.23110700254217703No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA550.21184808566366226No Hit
GTCTAGTATTTAATAGATTCAACAAATCAGTTAAATGAATGAGATTAATTCTGCCTTAGAGATAAGAAACA290.11170171789538558No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)