FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002878252

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002878252
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54889
Sequences flagged as poor quality0
Sequence length71
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4610.8398768423545702No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1310.23866348448687352No Hit
GTCCAATACAATGTAATTGGAGTCCCAAAAGGAAAAGAAAGAGAAACTGGAGCAGAAAAAATATTTGAAGA820.14939241013682159No Hit
GTTTAAAAGTTGTAGGTGATTAAAATAATTTGAAGGCGATCTTTTAAAAAGAGATTAAACCGAAGGTGATT630.1147770955929239No Hit
GATTAATTGGGAGTGGTAGGATGAAACAATTTGGAGAAGATAGAAGTTTGAAGTGGAAAACTGGAAGACAG620.11295523693271875No Hit
TACTTAAAGCTTCCAGAACCTTCAGCCTCATTGCCAAATCCTCCATCAAAGAAAAATAGCAAAATGACTGC560.10202408497148792No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)